WormBase Tree Display for Gene: WBGene00013260

WBGene00013260 SMap: S_parent: Sequence: Y57A10A
  Identity: Version: 2
    Name: CGC_name: rsr-2 Person_evidence: WBPerson2214
      Sequence_name: Y57A10A.19
      Molecular_name: Y57A10A.19
        Y57A10A.19.1
        CE25503
      Other_name: CELE_Y57A10A.19 Accession_evidence: NDB BX284602
      Public_name: rsr-2
    DB_info: Database: AceView gene 2M517
        WormQTL gene WBGene00013260
        WormFlux gene WBGene00013260
        NDB locus_tag CELE_Y57A10A.19
        Panther gene CAEEL|WormBase=WBGene00013260|UniProtKB=Q9U213
          family PTHR36562
        NCBI gene 174862
        RefSeq protein NM_001383969.2
        SwissProt UniProtAcc Q9U213
        UniProt_GCRP UniProtAcc Q9U213
        OMIM gene 606032
    Species: Caenorhabditis elegans
    History: Version_change: 1 26 May 2004 16:54:54 WBPerson1971 Event: Imported: Initial conversion from CDS class of WS125
        2 21 Mar 2006 10:14:28 WBPerson2970 Name_change: CGC_name: rsr-2
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: rsr
    Allele (66)
    Strain: WBStrain00004793
      WBStrain00004794
    RNASeq_FPKM (74)
    GO_annotation (12)
    Contained_in_operon: CEOP2720
    Ortholog (32)
    Paralog: WBGene00077636 Caenorhabditis elegans From_analysis: modENCODE_Pseudogenes
    Structured_description: Automated_description: Predicted to be involved in RNA splicing and mRNA processing. Located in nuclear speck. Part of chromatin. Expressed in germ line and somatic cell. Human ortholog(s) of this gene implicated in Parkinson's disease and autosomal dominant intellectual developmental disorder. Is an ortholog of human SRRM2 (serine/arginine repetitive matrix 2). Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Disease_info: Potential_model: DOID:0060307 Homo sapiens Inferred_automatically: Inferred by orthology to human genes with DO annotation (HGNC:16639)
      DOID:14330 Homo sapiens Inferred_automatically: Inferred by orthology to human genes with DO annotation (HGNC:16639)
  Molecular_info: Corresponding_CDS: Y57A10A.19
    Corresponding_transcript: Y57A10A.19.1
    Other_sequence (30)
    Associated_feature: WBsf644745
      WBsf981310
      WBsf990037
      WBsf990038
      WBsf990039
      WBsf222249
  Experimental_info: RNAi_result (37)
    Expr_pattern: Expr11044
      Expr11045
      Expr11046
      Expr1013342
      Expr1035916
      Expr1161032
      Expr2015567
      Expr2033802
    Drives_construct: WBCnstr00017711
      WBCnstr00017712
    Construct_product: WBCnstr00017712
    Regulate_expr_cluster: WBPaper00042477:rsr-2(RNAi)_downregulated_RNAseq
      WBPaper00042477:rsr-2(RNAi)_downregulated_TilingArray
      WBPaper00042477:rsr-2(RNAi)_upregulated_RNAseq
      WBPaper00042477:rsr-2(RNAi)_upregulated_TilingArray
      WBPaper00042477:RSR-2_complex
    Antibody: WBAntibody00002441
    Microarray_results (24)
    Expression_cluster (112)
    Interaction (31)
  Map_info: Map: II Position: 7.09362 Error: 0.02619
    Positive: Positive_clone: Y57A10A Inferred_automatically: From sequence, transcript, pseudogene data
    Pseudo_map_position
  Reference: WBPaper00033265
    WBPaper00034360
    WBPaper00036835
    WBPaper00038491
    WBPaper00039682
    WBPaper00042477
    WBPaper00045396
    WBPaper00055090
  Remark: Y57A10A.21 (WBGene00004707) was connected to rsr-2 based on published data, but rsr-2 is Y57A10A.19 (WBGene00013260). Curator_confirmed: WBPerson2970
    Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene