WormBase Tree Display for Gene: WBGene00013189
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| WBGene00013189 | SMap | S_parent | Sequence | Y54E2A | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | Sequence_name | Y54E2A.4 | |||||||
| Molecular_name | Y54E2A.4a | ||||||||
| Y54E2A.4a.1 | |||||||||
| CE43325 | |||||||||
| Y54E2A.4b | |||||||||
| CE49003 | |||||||||
| Y54E2A.4c | |||||||||
| CE48569 | |||||||||
| Y54E2A.4b.1 | |||||||||
| Y54E2A.4c.1 | |||||||||
| Other_name | CELE_Y54E2A.4 | Accession_evidence | NDB | BX284602 | |||||
| Public_name | Y54E2A.4 | ||||||||
| DB_info | Database | AceView | gene | 2P39 | |||||
| WormQTL | gene | WBGene00013189 | |||||||
| WormFlux | gene | WBGene00013189 | |||||||
| NDB | locus_tag | CELE_Y54E2A.4 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00013189|UniProtKB=Q9XWI1 | |||||||
| family | PTHR24075 | ||||||||
| NCBI | gene | 190256 | |||||||
| RefSeq | protein | NM_001306607.3 | |||||||
| NM_001306606.3 | |||||||||
| NM_064659.3 | |||||||||
| TrEMBL | UniProtAcc | U4PQS1 | |||||||
| Q9XWI1 | |||||||||
| U4PDW0 | |||||||||
| UniProt_GCRP | UniProtAcc | Q9XWI1 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:54 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| 2 | 27 Nov 2008 11:35:07 | WBPerson1983 | Event | Acquires_merge | WBGene00013191 | ||||
| Acquires_merge | WBGene00013191 | ||||||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele (480) | |||||||||
| Strain | WBStrain00002523 | ||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation (13) | |||||||||
| Ortholog (46) | |||||||||
| Paralog | WBGene00012896 | Caenorhabditis elegans | From_analysis | Panther | |||||
| WormBase-Compara | |||||||||
| WBGene00008502 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| WBGene00012342 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| WBGene00016194 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| WBGene00020964 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| WBGene00021905 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| Structured_description | Automated_description | Predicted to enable several functions, including ATP binding activity; ATP hydrolysis activity; and helicase activity. Predicted to be involved in gene expression and nucleic acid metabolic process. Is an ortholog of human ASCC3 (activating signal cointegrator 1 complex subunit 3). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | Y54E2A.4a | |||||||
| Y54E2A.4b | |||||||||
| Y54E2A.4c | |||||||||
| Corresponding_CDS_history | Y54E2A.4:wp197 | ||||||||
| Corresponding_transcript | Y54E2A.4a.1 | ||||||||
| Y54E2A.4b.1 | |||||||||
| Y54E2A.4c.1 | |||||||||
| Other_sequence (36) | |||||||||
| Associated_feature (12) | |||||||||
| Experimental_info | RNAi_result (11) | ||||||||
| Expr_pattern | Expr7041 | ||||||||
| Expr1012229 | |||||||||
| Expr1035860 | |||||||||
| Expr1160810 | |||||||||
| Expr2007897 | |||||||||
| Expr2026139 | |||||||||
| Drives_construct | WBCnstr00003099 | ||||||||
| Microarray_results (37) | |||||||||
| Expression_cluster (128) | |||||||||
| Interaction (56) | |||||||||
| Map_info | Positive | Positive_clone | Y54E2A | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | II | 23.4645 | |||||||
| Reference | WBPaper00029208 | ||||||||
| WBPaper00038491 | |||||||||
| WBPaper00055090 | |||||||||
| Method | Gene |
