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WormBase Tree Display for Gene: WBGene00013162

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Name Class

WBGene00013162SMapS_parentSequenceY53F4B
IdentityVersion2
NameSequence_nameY53F4B.16
Molecular_nameY53F4B.16
Other_nameCELE_Y53F4B.16Accession_evidenceNDBBX284602
Public_nameY53F4B.16
DB_infoDatabaseAceViewgene2P336
WormQTLgeneWBGene00013162
WormFluxgeneWBGene00013162
NDBlocus_tagCELE_Y53F4B.16
NCBIgene190215
SpeciesCaenorhabditis elegans
HistoryVersion_change126 May 2004 16:54:54WBPerson1971EventImportedInitial conversion from CDS class of WS125
221 Nov 2019 15:05:15WBPerson4025EventChanged_classCDSPseudogene
StatusLive
Gene_infoBiotypeSO:0000336
Allele (28)
RNASeq_FPKM (74)
OrthologWBGene00149029Caenorhabditis brenneriFrom_analysisInparanoid_8
WBGene00154872Caenorhabditis brenneriFrom_analysisInparanoid_8
WBGene00139555Caenorhabditis brenneriFrom_analysisInparanoid_8
WBGene00164117Caenorhabditis brenneriFrom_analysisInparanoid_8
WBGene00164159Caenorhabditis brenneriFrom_analysisInparanoid_8
WBGene00144320Caenorhabditis brenneriFrom_analysisInparanoid_8
WBGene00164903Caenorhabditis brenneriFrom_analysisInparanoid_8
ParalogWBGene00021606Caenorhabditis elegansFrom_analysisTreeFam
WBGene00013163Caenorhabditis elegansFrom_analysisTreeFam
WBGene00013221Caenorhabditis elegansFrom_analysisTreeFam
Inparanoid_8
WBGene00022070Caenorhabditis elegansFrom_analysisTreeFam
Structured_descriptionAutomated_descriptionEnriched in ABplpappaa; OLQDL; OLQDR; OLQVL; and OLQVR based on single-cell RNA-seq studies. Is affected by several genes including sir-2.1; clk-1; and nhr-49 based on microarray and RNA-seq studies. Is affected by six chemicals including multi-walled carbon nanotube; Doxycycline; and dafa#1 based on RNA-seq and microarray studies.Paper_evidenceWBPaper00065943
Curator_confirmedWBPerson324
WBPerson37462
Inferred_automaticallyThis description was generated automatically by a script based on data from the WS291 version of WormBase
Date_last_updated29 Nov 2023 00:00:00
Molecular_infoCorresponding_CDS_historyY53F4B.16:wp153
Y53F4B.16:wp274
Corresponding_pseudogeneY53F4B.16
Other_sequenceMCC01766_1
Associated_featureWBsf990886
Experimental_infoExpr_patternExpr1020753
Expr1160707
Expr2007845
Expr2026085
Microarray_results (17)
Expression_cluster (39)
Map_infoPositivePositive_cloneY53F4BInferred_automaticallyFrom sequence, transcript, pseudogene data
Interpolated_map_positionII23.9866
MethodGene