WormBase Tree Display for Gene: WBGene00013162
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WBGene00013162 | SMap | S_parent | Sequence | Y53F4B | ||||||
---|---|---|---|---|---|---|---|---|---|---|
Identity | Version | 2 | ||||||||
Name | Sequence_name | Y53F4B.16 | ||||||||
Molecular_name | Y53F4B.16 | |||||||||
Other_name | CELE_Y53F4B.16 | Accession_evidence | NDB | BX284602 | ||||||
Public_name | Y53F4B.16 | |||||||||
DB_info | Database | AceView | gene | 2P336 | ||||||
WormQTL | gene | WBGene00013162 | ||||||||
WormFlux | gene | WBGene00013162 | ||||||||
NDB | locus_tag | CELE_Y53F4B.16 | ||||||||
NCBI | gene | 190215 | ||||||||
Species | Caenorhabditis elegans | |||||||||
History | Version_change | 1 | 26 May 2004 16:54:54 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | |||
2 | 21 Nov 2019 15:05:15 | WBPerson4025 | Event | Changed_class | CDS | Pseudogene | ||||
Status | Live | |||||||||
Gene_info | Biotype | SO:0000336 | ||||||||
Allele (28) | ||||||||||
RNASeq_FPKM (74) | ||||||||||
Ortholog | WBGene00149029 | Caenorhabditis brenneri | From_analysis | Inparanoid_8 | ||||||
WBGene00154872 | Caenorhabditis brenneri | From_analysis | Inparanoid_8 | |||||||
WBGene00139555 | Caenorhabditis brenneri | From_analysis | Inparanoid_8 | |||||||
WBGene00164117 | Caenorhabditis brenneri | From_analysis | Inparanoid_8 | |||||||
WBGene00164159 | Caenorhabditis brenneri | From_analysis | Inparanoid_8 | |||||||
WBGene00144320 | Caenorhabditis brenneri | From_analysis | Inparanoid_8 | |||||||
WBGene00164903 | Caenorhabditis brenneri | From_analysis | Inparanoid_8 | |||||||
Paralog | WBGene00021606 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
WBGene00013163 | Caenorhabditis elegans | From_analysis | TreeFam | |||||||
WBGene00013221 | Caenorhabditis elegans | From_analysis | TreeFam | |||||||
Inparanoid_8 | ||||||||||
WBGene00022070 | Caenorhabditis elegans | From_analysis | TreeFam | |||||||
Structured_description | Automated_description | Enriched in ABplpappaa; OLQDL; OLQDR; OLQVL; and OLQVR based on single-cell RNA-seq studies. Is affected by several genes including sir-2.1; clk-1; and nhr-49 based on microarray and RNA-seq studies. Is affected by six chemicals including multi-walled carbon nanotube; Doxycycline; and dafa#1 based on RNA-seq and microarray studies. | Paper_evidence | WBPaper00065943 | ||||||
Curator_confirmed | WBPerson324 | |||||||||
WBPerson37462 | ||||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | |||||||||
Date_last_updated | 29 Nov 2023 00:00:00 | |||||||||
Molecular_info | Corresponding_CDS_history | Y53F4B.16:wp153 | ||||||||
Y53F4B.16:wp274 | ||||||||||
Corresponding_pseudogene | Y53F4B.16 | |||||||||
Other_sequence | MCC01766_1 | |||||||||
Associated_feature | WBsf990886 | |||||||||
Experimental_info | Expr_pattern | Expr1020753 | ||||||||
Expr1160707 | ||||||||||
Expr2007845 | ||||||||||
Expr2026085 | ||||||||||
Microarray_results (17) | ||||||||||
Expression_cluster (39) | ||||||||||
Map_info | Positive | Positive_clone | Y53F4B | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
Interpolated_map_position | II | 23.9866 | ||||||||
Method | Gene |