WormBase Tree Display for Gene: WBGene00013062
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| WBGene00013062 | SMap | S_parent | Sequence | Y51A2A | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | Sequence_name | Y51A2A.6 | |||||||
| Molecular_name | Y51A2A.6 | ||||||||
| Y51A2A.6.1 | |||||||||
| CE20277 | |||||||||
| Other_name | CELE_Y51A2A.6 | Accession_evidence | NDB | BX284605 | |||||
| Public_name | Y51A2A.6 | ||||||||
| DB_info | Database | AceView | gene | 5S785 | |||||
| WormQTL | gene | WBGene00013062 | |||||||
| WormFlux | gene | WBGene00013062 | |||||||
| NDB | locus_tag | CELE_Y51A2A.6 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00013062|UniProtKB=Q9XWP9 | |||||||
| family | PTHR23124 | ||||||||
| NCBI | gene | 190122 | |||||||
| RefSeq | protein | NM_075181.1 | |||||||
| TREEFAM | TREEFAM_ID | TF315870 | |||||||
| TrEMBL | UniProtAcc | Q9XWP9 | |||||||
| UniProt_GCRP | UniProtAcc | Q9XWP9 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:54 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele (22) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Ortholog | WBGene00042522 | Caenorhabditis briggsae | From_analysis | OMA | |||||
| CSP26.g3047 | Caenorhabditis zanzibari | From_analysis | WormBase-Compara | ||||||
| CSP40.g14946 | Caenorhabditis tribulationis | From_analysis | WormBase-Compara | ||||||
| Cnig_chr_I.g3643 | Caenorhabditis nigoni | From_analysis | WormBase-Compara | ||||||
| Csp11.Scaffold376.g896 | Caenorhabditis tropicalis | From_analysis | WormBase-Compara | ||||||
| Csp11.Scaffold629.g13883 | Caenorhabditis tropicalis | From_analysis | WormBase-Compara | ||||||
| FL83_22263 | Caenorhabditis latens | From_analysis | WormBase-Compara | ||||||
| chrV_pilon.g17658 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| chrV_pilon.g17660 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| Paralog (71) | |||||||||
| Structured_description | Automated_description | Is affected by rsr-2; hda-1; and sir-2.1 based on tiling array; RNA-seq; and microarray studies. Is predicted to encode a protein with the following domain: C-type lectin fold. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | Y51A2A.6 | |||||||
| Corresponding_transcript | Y51A2A.6.1 | ||||||||
| Experimental_info | RNAi_result | WBRNAi00020857 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00057116 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1020724 | ||||||||
| Expr1160563 | |||||||||
| Microarray_results | SMD_Y51A2A.6 | ||||||||
| A_12_P106194 | |||||||||
| Aff_Y51A2A.6 | |||||||||
| GPL8673_Y51A2A_6P00267 | |||||||||
| Expression_cluster | WBPaper00042477:rsr-2(RNAi)_downregulated_TilingArray | ||||||||
| WBPaper00045420:fertilization_downregulated_transcript | |||||||||
| WBPaper00056868:P.aeruginosa_upregulated_smallRNA | |||||||||
| WBPaper00061479:hda-1(ne4752)_upregulated | |||||||||
| WBPaper00061527:sre-33-ZK1025.1_8337 | |||||||||
| WBPaper00026929:sir-2.1_overexpression_regulated | |||||||||
| Interaction (11) | |||||||||
| Map_info | Positive | Positive_clone | Y51A2A | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | V | 15.3205 | |||||||
| Method | Gene |
