WormBase Tree Display for Gene: WBGene00013001
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WBGene00013001 | SMap | S_parent | Sequence | Y48E1B | |||
---|---|---|---|---|---|---|---|
Identity | Version | 3 | |||||
Name | CGC_name | noa-1 | |||||
Sequence_name | Y48E1B.2 | ||||||
Molecular_name | Y48E1B.2a | ||||||
Y48E1B.2a.1 | |||||||
CE50294 | |||||||
Y48E1B.2b | |||||||
CE28990 | |||||||
Y48E1B.2b.1 | |||||||
Other_name | CELE_Y48E1B.2 | Accession_evidence | NDB | BX284602 | |||
Public_name | noa-1 | ||||||
DB_info | Database | AceView | gene | 2N824 | |||
WormQTL | gene | WBGene00013001 | |||||
WormFlux | gene | WBGene00013001 | |||||
NDB | locus_tag | CELE_Y48E1B.2 | |||||
Panther | gene | CAEEL|WormBase=WBGene00013001|UniProtKB=O18196 | |||||
family | PTHR46406 | ||||||
NCBI | gene | 174998 | |||||
RefSeq | protein | NM_064445.6 | |||||
NM_001393226.1 | |||||||
TREEFAM | TREEFAM_ID | TF314460 | |||||
TrEMBL | UniProtAcc | O18196 | |||||
Q9U285 | |||||||
UniProt_GCRP | UniProtAcc | O18196 | |||||
Species | Caenorhabditis elegans | ||||||
History (2) | |||||||
Status | Live | ||||||
Gene_info | Biotype | SO:0001217 | |||||
Gene_class | noa | ||||||
Allele (302) | |||||||
Strain | WBStrain00001907 | ||||||
WBStrain00002257 | |||||||
WBStrain00037518 | |||||||
RNASeq_FPKM (74) | |||||||
GO_annotation | 00031604 | ||||||
00119973 | |||||||
Contained_in_operon | CEOP2616 | ||||||
CEOP5612 | |||||||
Ortholog (36) | |||||||
Paralog | WBGene00003596 | Caenorhabditis elegans | From_analysis | WormBase-Compara | |||
WBGene00003821 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||
WBGene00016907 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||
WBGene00022054 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||
Structured_description | Automated_description | Predicted to enable GTP binding activity. Predicted to be extrinsic component of mitochondrial inner membrane. Is an ortholog of human NOA1 (nitric oxide associated 1). | Paper_evidence | WBPaper00065943 | |||
Curator_confirmed | WBPerson324 | ||||||
WBPerson37462 | |||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||
Molecular_info | Corresponding_CDS | Y48E1B.2a | |||||
Y48E1B.2b | |||||||
Corresponding_CDS_history | Y48E1B.2a:wp60 | ||||||
Y48E1B.2a:wp245 | |||||||
Y48E1B.2b:wp60 | |||||||
Corresponding_transcript | Y48E1B.2a.1 | ||||||
Y48E1B.2b.1 | |||||||
Corresponding_transcript_history | Y48E1B.2c:wp264 | ||||||
Other_sequence (61) | |||||||
Associated_feature | WBsf990451 | ||||||
WBsf1013657 | |||||||
WBsf224183 | |||||||
Experimental_info | RNAi_result | WBRNAi00115307 | Inferred_automatically | RNAi_primary | |||
WBRNAi00111248 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00111254 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00111255 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00056916 | Inferred_automatically | RNAi_primary | |||||
Expr_pattern | Chronogram2 | ||||||
Expr7008 | |||||||
Expr7009 | |||||||
Expr1020773 | |||||||
Expr1035776 | |||||||
Expr1160364 | |||||||
Expr2007666 | |||||||
Expr2025908 | |||||||
Drives_construct | WBCnstr00002696 | ||||||
WBCnstr00004397 | |||||||
Microarray_results (28) | |||||||
Expression_cluster (110) | |||||||
Interaction (33) | |||||||
Map_info | Map | II | Position | 17.959 | |||
Positive | Positive_clone | Y48E1B | Inferred_automatically | From sequence, transcript, pseudogene data | |||
Pseudo_map_position | |||||||
Reference | WBPaper00038491 | ||||||
WBPaper00045573 | |||||||
WBPaper00050531 | |||||||
WBPaper00055090 | |||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||
Method | Gene |