WormBase Tree Display for Gene: WBGene00012826

WBGene00012826 SMap: S_parent: Sequence: Y43F8C
  Identity: Version: 2
    Name: CGC_name: dyf-19 Paper_evidence: WBPaper00044470
          Person_evidence: WBPerson2133
      Sequence_name: Y43F8C.4
      Molecular_name: Y43F8C.4
        Y43F8C.4.1
        CE34119
      Other_name: CELE_Y43F8C.4 Accession_evidence: NDB BX284605
      Public_name: dyf-19
    DB_info: Database: AceView gene 5U105
        WormQTL gene WBGene00012826
        WormFlux gene WBGene00012826
        NDB locus_tag CELE_Y43F8C.4
        Panther gene CAEEL|WormBase=WBGene00012826|UniProtKB=Q9XWN2
          family PTHR33689
        NCBI gene 180283
        RefSeq protein NM_075403.5
        TREEFAM TREEFAM_ID TF328742
        TrEMBL UniProtAcc Q9XWN2
        UniProt_GCRP UniProtAcc Q9XWN2
    Species: Caenorhabditis elegans
    History: Version_change: 1 26 May 2004 16:54:54 WBPerson1971 Event: Imported: Initial conversion from CDS class of WS125
        2 25 Nov 2013 08:28:53 WBPerson2970 Name_change: CGC_name: dyf-19
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: dyf
    Allele (160)
    RNASeq_FPKM (74)
    GO_annotation: 00103667
      00103668
      00103669
      00103670
      00103671
      00103672
      00119827
      00119828
      00119829
    Ortholog (27)
    Structured_description: Concise_description: dyf-19 encodes the C. elegans ortholog of mammalian transition fibre protein FBF1 (Fas(TNFRSF6)-binding factor 1); DYF-19 is required for actively regulating transit of assembled intraflagellar transport (IFT) particles through the ciliary base, and thus for proper ciliogenesis; DYF-19 physically interacts with DYF-11, a component of the IFT-B subcomplex orthologous to mammalian IFT54; DYF-19 localizes to ciliary transition fibers. Paper_evidence: WBPaper00044470
          Curator_confirmed: WBPerson1843
          Date_last_updated: 05 Dec 2013 00:00:00
      Automated_description: Involved in non-motile cilium assembly. Located in ciliary basal body and dendrite. Expressed in ciliated neurons. Is an ortholog of human FBF1 (Fas binding factor 1). Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: Y43F8C.4
    Corresponding_CDS_history: Y43F8C.4:wp101
    Corresponding_transcript: Y43F8C.4.1
    Other_sequence: MHC07414
      MHC10168_1
      CJC03827_1
      MH01791
      SR04873
      MHC07447_1
      JI468283.1
    Associated_feature: WBsf1003321
      WBsf1003322
      WBsf1021791
      WBsf1021792
  Experimental_info: RNAi_result: WBRNAi00007323 Inferred_automatically: RNAi_primary
      WBRNAi00020569 Inferred_automatically: RNAi_primary
      WBRNAi00037063 Inferred_automatically: RNAi_primary
      WBRNAi00056529 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr11382
      Expr15047
      Expr1028973
      Expr1035674
      Expr1160006
      Expr2011131
      Expr2029367
    Drives_construct: WBCnstr00018811
      WBCnstr00019734
    Construct_product: WBCnstr00019734
      WBCnstr00041888
    Microarray_results (20)
    Expression_cluster (130)
    Interaction (78)
  Map_info: Map: V Position: 22.5899
    Positive: Positive_clone: Y43F8C Inferred_automatically: From sequence, transcript, pseudogene data
    Pseudo_map_position
  Reference: WBPaper00038491
    WBPaper00044470
    WBPaper00049989
    WBPaper00059725
    WBPaper00060888
    WBPaper00063946
    WBPaper00064720
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene