WormBase Tree Display for Gene: WBGene00012712

WBGene00012712 SMap: S_parent: Sequence: Y39E4A
  Identity: Version: 2
    Name: CGC_name: ttm-1 Person_evidence: WBPerson26
      Sequence_name: Y39E4A.2
      Molecular_name: Y39E4A.2a
        Y39E4A.2a.1
        CE16616
        Y39E4A.2b
        CE16617
        Y39E4A.2c
        CE50587
        Y39E4A.2b.1
        Y39E4A.2c.1
      Other_name: CELE_Y39E4A.2 Accession_evidence: NDB BX284603
      Public_name: ttm-1
    DB_info: Database: AceView gene 3O42
        WormQTL gene WBGene00012712
        WormFlux gene WBGene00012712
        NDB locus_tag CELE_Y39E4A.2
        Panther gene CAEEL|WormBase=WBGene00012712|UniProtKB=O45923
          family PTHR11562
        NCBI gene 176715
        RefSeq protein NM_067291.8
            NM_067290.6
            NM_001312975.3
        SwissProt UniProtAcc O45923
        TREEFAM TREEFAM_ID TF313382
        UniProt_GCRP UniProtAcc O45923
    Species: Caenorhabditis elegans
    History: Version_change: 1 26 May 2004 16:54:54 WBPerson1971 Event: Imported: Initial conversion from CDS class of WS125
        2 04 Nov 2004 13:13:56 WBPerson2970 Name_change: CGC_name: ttm-1
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: ttm
    Allele (254)
    Strain: WBStrain00033202
    RNASeq_FPKM (74)
    GO_annotation (17)
    Contained_in_operon: CEOP3837
    Ortholog (41)
    Paralog: WBGene00011821 Caenorhabditis elegans From_analysis: TreeFam
            Panther
            WormBase-Compara
      WBGene00000393 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00006590 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00010644 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00013668 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00018948 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00019803 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00019841 Caenorhabditis elegans From_analysis: WormBase-Compara
      WBGene00044481 Caenorhabditis elegans From_analysis: WormBase-Compara
    Structured_description: Automated_description: Predicted to enable zinc ion transmembrane transporter activity. Involved in response to cadmium ion and response to nematicide. Predicted to be located in plasma membrane. Expressed in head neurons; hypodermis; seam cell; and vulva. Human ortholog(s) of this gene implicated in prostate carcinoma in situ. Is an ortholog of human SLC30A3 (solute carrier family 30 member 3) and SLC30A4 (solute carrier family 30 member 4). Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Disease_info: Potential_model: DOID:8634 Homo sapiens Inferred_automatically: Inferred by orthology to human genes with DO annotation (HGNC:11015)
  Molecular_info: Corresponding_CDS: Y39E4A.2a
      Y39E4A.2b
      Y39E4A.2c
    Corresponding_transcript: Y39E4A.2a.1
      Y39E4A.2b.1
      Y39E4A.2c.1
    Other_sequence (86)
    Associated_feature (13)
  Experimental_info: RNAi_result (12)
    Expr_pattern: Expr11033
      Expr11034
      Expr1015234
      Expr1035622
      Expr1159721
      Expr2017571
      Expr2035710
    Drives_construct: WBCnstr00017864
      WBCnstr00017865
    Construct_product: WBCnstr00017864
      WBCnstr00017865
    Microarray_results (28)
    Expression_cluster (123)
    Interaction (42)
    WBProcess: WBbiopr:00000039
  Map_info: Map: III Position: 20.6712 Error: 0.003963
    Positive: Positive_clone: Y39E4A Inferred_automatically: From sequence, transcript, pseudogene data
    Pseudo_map_position
  Reference (13)
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene