WormBase Tree Display for Gene: WBGene00012663
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| WBGene00012663 | SMap | S_parent | Sequence | CHROMOSOME_III | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | hex-3 | Person_evidence | WBPerson2099 | |||||
| Sequence_name | Y39A1C.4 | ||||||||
| Molecular_name | Y39A1C.4 | ||||||||
| Y39A1C.4.1 | |||||||||
| CE41720 | |||||||||
| Other_name | CELE_Y39A1C.4 | Accession_evidence | NDB | BX284603 | |||||
| Public_name | hex-3 | ||||||||
| DB_info | Database (12) | ||||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:54 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| 2 | 19 Jul 2007 09:29:24 | WBPerson2970 | Name_change | CGC_name | hex-3 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | hex | ||||||||
| Allele (127) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation (13) | |||||||||
| Ortholog (34) | |||||||||
| Paralog | WBGene00013497 | Caenorhabditis elegans | From_analysis | TreeFam | |||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| WBGene00015767 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WormBase-Compara | |||||||||
| WBGene00021766 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| Structured_description | Concise_description | hex-3 encodes a beta-N-acetylhexosaminidase. | Paper_evidence | WBPaper00030867 | |||||
| Curator_confirmed | WBPerson1843 | ||||||||
| Date_last_updated | 23 Jul 2007 00:00:00 | ||||||||
| Automated_description | Enables beta-N-acetylgalactosaminidase activity. Involved in polysaccharide metabolic process. Predicted to be located in membrane. Expressed in intestine. Is an ortholog of human HEXD (hexosaminidase D). | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | Y39A1C.4 | |||||||
| Corresponding_CDS_history | Y39A1C.4:wp135 | ||||||||
| Y39A1C.4:wp183 | |||||||||
| Corresponding_transcript | Y39A1C.4.1 | ||||||||
| Other_sequence (23) | |||||||||
| Associated_feature | WBsf645588 | ||||||||
| WBsf994170 | |||||||||
| WBsf994171 | |||||||||
| WBsf225768 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00036894 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00006489 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr4823 | ||||||||
| Expr1027601 | |||||||||
| Expr1035598 | |||||||||
| Expr1159643 | |||||||||
| Expr2012403 | |||||||||
| Expr2030639 | |||||||||
| Drives_construct | WBCnstr00004957 | ||||||||
| Microarray_results (21) | |||||||||
| Expression_cluster (92) | |||||||||
| Interaction | WBInteraction000325197 | ||||||||
| WBInteraction000333703 | |||||||||
| WBInteraction000439133 | |||||||||
| WBInteraction000455686 | |||||||||
| Map_info | Map | III | Position | 5.44793 | Error | 0.007454 | |||
| Positive | Positive_clone | Y39A1C | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00030867 | ||||||||
| WBPaper00035543 | |||||||||
| WBPaper00038491 | |||||||||
| WBPaper00041228 | |||||||||
| WBPaper00046113 | |||||||||
| WBPaper00055090 | |||||||||
| WBPaper00059755 | |||||||||
| WBPaper00065036 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
