WormBase Tree Display for Gene: WBGene00012569
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| WBGene00012569 | SMap | S_parent | Sequence | Y37H2A | ||||||
|---|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 3 | ||||||||
| Name | CGC_name | fbxc-46 | Person_evidence | WBPerson655 | ||||||
| Sequence_name | Y37H2A.9 | |||||||||
| Molecular_name | Y37H2A.9 | |||||||||
| Other_name | CELE_Y37H2A.9 | Accession_evidence | NDB | BX284605 | ||||||
| Public_name | fbxc-46 | |||||||||
| DB_info | Database | AceView | gene | 5S616 | ||||||
| WormQTL | gene | WBGene00012569 | ||||||||
| NDB | locus_tag | CELE_Y37H2A.9 | ||||||||
| NCBI | gene | 189632 | ||||||||
| Species | Caenorhabditis elegans | |||||||||
| History | Version_change | 1 | 26 May 2004 16:54:54 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | |||
| 2 | 21 Feb 2008 15:25:56 | WBPerson4025 | Event | Changed_class | CDS | Pseudogene | ||||
| 3 | 17 Jun 2008 14:44:53 | WBPerson2970 | Name_change | CGC_name | fbxc-46 | |||||
| Status | Live | |||||||||
| Gene_info | Biotype | SO:0000336 | ||||||||
| Gene_class | fbxc | |||||||||
| Allele (28) | ||||||||||
| RNASeq_FPKM (74) | ||||||||||
| Paralog | WBGene00015819 | Caenorhabditis elegans | From_analysis | modENCODE_Pseudogenes | ||||||
| Structured_description | Automated_description | Enriched in germ line and head mesodermal cell based on RNA-seq studies. Is affected by several genes including eat-2; clk-1; and pgl-1 based on RNA-seq and microarray studies. Is affected by seven chemicals including rotenone; stavudine; and allantoin based on RNA-seq and microarray studies. | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | |||||||||
| WBPerson37462 | ||||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | |||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | |||||||||
| Molecular_info | Corresponding_CDS_history | Y37H2A.9:wp188 | ||||||||
| Corresponding_pseudogene | Y37H2A.9 | |||||||||
| Associated_feature | WBsf669838 | |||||||||
| Experimental_info | Microarray_results | 182251_at | ||||||||
| A_12_P111153 | ||||||||||
| Aff_Y37H2A.K | ||||||||||
| GPL19516_CGZ0044482 | ||||||||||
| GPL21109_Y37H2A.9 | ||||||||||
| GPL8304_CE_WBGene00012569_A | ||||||||||
| GPL8673_Y37H2A_9P00303 | ||||||||||
| GPL8673_Y37H2A_9P00556 | ||||||||||
| Expression_cluster (46) | ||||||||||
| Map_info | Map | V | Position | 14.3525 | Error | 0.022167 | ||||
| Positive | Positive_clone | Y37H2A | Inferred_automatically | From sequence, transcript, pseudogene data | ||||||
| Pseudo_map_position | ||||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | ||||||||
| Method | Gene |
