WormBase Tree Display for Gene: WBGene00012528
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| WBGene00012528 | SMap | S_parent | Sequence | Y32F6A | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | pap-1 | Person_evidence | WBPerson1574 | |||||
| Sequence_name | Y32F6A.3 | ||||||||
| Molecular_name | Y32F6A.3 | ||||||||
| Y32F6A.3.1 | |||||||||
| CE20204 | |||||||||
| Y32F6A.3.2 | |||||||||
| Y32F6A.3.3 | |||||||||
| Other_name | CELE_Y32F6A.3 | Accession_evidence | NDB | BX284605 | |||||
| Public_name | pap-1 | ||||||||
| DB_info | Database (12) | ||||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:53 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| 2 | 15 Nov 2004 10:37:27 | WBPerson2970 | Name_change | CGC_name | pap-1 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | pap | ||||||||
| Allele (74) | |||||||||
| Strain | WBStrain00003164 | ||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation (19) | |||||||||
| Contained_in_operon | CEOP5558 | ||||||||
| Ortholog (50) | |||||||||
| Paralog | WBGene00009658 | Caenorhabditis elegans | From_analysis | Inparanoid_8 | |||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| WBGene00011791 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WormBase-Compara | |||||||||
| Structured_description | Concise_description | pap-1 encodes a poly (A) polymerase; large-scale RNAi screens indicate that PAP-1 activity is essential for reproduction, embryonic and larval development, proper body morphology, normal rates of growth, and coordinated locomotion. | Paper_evidence | WBPaper00004651 | |||||
| WBPaper00005437 | |||||||||
| WBPaper00005654 | |||||||||
| WBPaper00006395 | |||||||||
| WBPaper00024497 | |||||||||
| WBPaper00025054 | |||||||||
| Curator_confirmed | WBPerson1843 | ||||||||
| Date_last_updated | 05 Dec 2007 00:00:00 | ||||||||
| Automated_description | Predicted to enable RNA binding activity; ion binding activity; and poly(A) RNA polymerase activity. Predicted to be involved in mRNA polyadenylation. Predicted to be located in nucleus. Is an ortholog of human PAPOLB (poly(A) polymerase beta). | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | Y32F6A.3 | |||||||
| Corresponding_transcript | Y32F6A.3.1 | ||||||||
| Y32F6A.3.2 | |||||||||
| Y32F6A.3.3 | |||||||||
| Other_sequence (17) | |||||||||
| Associated_feature | WBsf647157 | ||||||||
| WBsf655109 | |||||||||
| WBsf1001111 | |||||||||
| WBsf1020305 | |||||||||
| Experimental_info | RNAi_result (20) | ||||||||
| Expr_pattern | Chronogram1994 | ||||||||
| Expr6917 | |||||||||
| Expr1020209 | |||||||||
| Expr1035543 | |||||||||
| Expr1159317 | |||||||||
| Expr2014721 | |||||||||
| Expr2032955 | |||||||||
| Drives_construct | WBCnstr00003640 | ||||||||
| WBCnstr00029923 | |||||||||
| Construct_product | WBCnstr00029923 | ||||||||
| Microarray_results (23) | |||||||||
| Expression_cluster (112) | |||||||||
| Interaction (202) | |||||||||
| Map_info | Map | V | Position | 2.56013 | Error | 0.001038 | |||
| Positive | Positive_clone | Y32F6A | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00005437 | ||||||||
| WBPaper00032289 | |||||||||
| WBPaper00036363 | |||||||||
| WBPaper00038491 | |||||||||
| WBPaper00055090 | |||||||||
| WBPaper00061983 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
