WormBase Tree Display for Gene: WBGene00012460
expand all nodes | collapse all nodes | view schema
| WBGene00012460 | SMap | S_parent | Sequence | Y17G7B | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | dhps-1 | Person_evidence | WBPerson4055 | |||||
| Sequence_name | Y17G7B.4 | ||||||||
| Molecular_name | Y17G7B.4 | ||||||||
| Y17G7B.4.1 | |||||||||
| CE19037 | |||||||||
| Other_name | CELE_Y17G7B.4 | Accession_evidence | NDB | BX284602 | |||||
| Public_name | dhps-1 | ||||||||
| DB_info | Database (12) | ||||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:53 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| 2 | 30 Nov 2011 16:10:06 | WBPerson2970 | Name_change | CGC_name | dhps-1 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | dhps | ||||||||
| Allele (116) | |||||||||
| Strain | WBStrain00049333 | ||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00104468 | ||||||||
| 00104469 | |||||||||
| 00104470 | |||||||||
| 00104471 | |||||||||
| 00104472 | |||||||||
| 00104473 | |||||||||
| 00104474 | |||||||||
| 00119586 | |||||||||
| Contained_in_operon | CEOP2584 | ||||||||
| Ortholog (37) | |||||||||
| Structured_description | Concise_description | dhps-1 encodes a deoxyhypusine synthase; by homology, DHPS-1 is predicted to function in peptidyl-lysine modification to hypusine. | Curator_confirmed | WBPerson1843 | |||||
| Date_last_updated | 29 Jan 2013 00:00:00 | ||||||||
| Automated_description | Predicted to enable deoxyhypusine synthase activity. Predicted to be located in cytoplasm. Is an ortholog of human DHPS (deoxyhypusine synthase). | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | Y17G7B.4 | |||||||
| Corresponding_transcript | Y17G7B.4.1 | ||||||||
| Other_sequence (32) | |||||||||
| Associated_feature | WBsf989984 | ||||||||
| WBsf989985 | |||||||||
| WBsf989986 | |||||||||
| WBsf222229 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00036673 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00055583 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1019928 | ||||||||
| Expr1035513 | |||||||||
| Expr1159089 | |||||||||
| Expr2010892 | |||||||||
| Expr2029131 | |||||||||
| Microarray_results (20) | |||||||||
| Expression_cluster (113) | |||||||||
| Interaction (148) | |||||||||
| Map_info | Map | II | Position | 5.61506 | |||||
| Positive | Positive_clone | Y17G7B | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00038491 | ||||||||
| WBPaper00041831 | |||||||||
| WBPaper00055090 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
