WormBase Tree Display for Gene: WBGene00012268

WBGene00012268 SMap: S_parent: Sequence: W04G5
  Identity: Version: 1
    Name: Sequence_name: W04G5.8
      Molecular_name: W04G5.8
        W04G5.8.1
        CE40523
      Other_name: CELE_W04G5.8 Accession_evidence: NDB BX284601
      Public_name: W04G5.8
    DB_info: Database: AceView gene 1M241
        WormQTL gene WBGene00012268
        WormFlux gene WBGene00012268
        NDB locus_tag CELE_W04G5.8
        Panther gene CAEEL|WormBase=WBGene00012268|UniProtKB=O18172
          family PTHR31464
        NCBI gene 189203
        RefSeq protein NM_060571.4
        TREEFAM TREEFAM_ID TF321359
        TrEMBL UniProtAcc O18172
        UniProt_GCRP UniProtAcc O18172
    Species: Caenorhabditis elegans
    History: Version_change: 1 26 May 2004 16:54:53 WBPerson1971 Event: Imported: Initial conversion from CDS class of WS125
    Status: Live
  Gene_info: Biotype: SO:0001217
    Allele (38)
    RNASeq_FPKM (74)
    Ortholog (23)
    Paralog: WBGene00012267 Caenorhabditis elegans From_analysis: TreeFam
            Inparanoid_8
            Panther
            WormBase-Compara
      WBGene00018460 Caenorhabditis elegans From_analysis: TreeFam
            Panther
            WormBase-Compara
      WBGene00018459 Caenorhabditis elegans From_analysis: TreeFam
            Panther
            WormBase-Compara
      WBGene00022375 Caenorhabditis elegans From_analysis: TreeFam
            Inparanoid_8
            Panther
            WormBase-Compara
      WBGene00013613 Caenorhabditis elegans From_analysis: TreeFam
            Panther
            WormBase-Compara
      WBGene00018461 Caenorhabditis elegans From_analysis: TreeFam
            WormBase-Compara
      WBGene00021196 Caenorhabditis elegans From_analysis: Panther
            WormBase-Compara
      WBGene00021195 Caenorhabditis elegans From_analysis: Panther
            WormBase-Compara
      WBGene00021197 Caenorhabditis elegans From_analysis: Panther
            WormBase-Compara
      WBGene00044363 Caenorhabditis elegans From_analysis: Panther
            WormBase-Compara
    Structured_description: Automated_description: Enriched in several structures, including ABplpappaa; MSpaaapa; head mesodermal cell; nerve ring neurons; and somatic gonad precursor based on RNA-seq and single-cell RNA-seq studies. Is affected by several genes including pie-1; eat-2; and sir-2.1 based on microarray; tiling array; and RNA-seq studies. Is affected by seven chemicals including Sodium Chloride; allantoin; and Psoralens based on RNA-seq and microarray studies. Is predicted to encode a protein with the following domains: Protein of unknown function (DUF684) and Protein of unknown function DUF684. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: W04G5.8
    Corresponding_CDS_history: W04G5.8:wp166
    Corresponding_transcript: W04G5.8.1
    Other_sequence: FD513945.1
      CRC12555_1
      CBC02895_1
      CR05397
      CSC00352_1
    Associated_feature: WBsf656950
  Experimental_info: RNAi_result: WBRNAi00004430 Inferred_automatically: RNAi_primary
      WBRNAi00036285 Inferred_automatically: RNAi_primary
      WBRNAi00054796 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr1158337
      Expr2006788
      Expr2025012
    Drives_construct: WBCnstr00030037
    Construct_product: WBCnstr00030037
    Microarray_results (16)
    Expression_cluster (100)
    Interaction: WBInteraction000030624
      WBInteraction000146545
      WBInteraction000292423
      WBInteraction000311920
      WBInteraction000394512
      WBInteraction000396290
      WBInteraction000445676
  Map_info: Positive: Positive_clone: W04G5 Inferred_automatically: From sequence, transcript, pseudogene data
    Interpolated_map_position: I 9.47937
  Method: Gene