WormBase Tree Display for Gene: WBGene00012097
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| WBGene00012097 | SMap | S_parent | Sequence | CHROMOSOME_III | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | abcf-2 | Paper_evidence | WBPaper00028961 | |||||
| Sequence_name | T27E9.7 | ||||||||
| Molecular_name | T27E9.7 | ||||||||
| T27E9.7.1 | |||||||||
| CE18971 | |||||||||
| Other_name | CELE_T27E9.7 | Accession_evidence | NDB | BX284603 | |||||
| Public_name | abcf-2 | ||||||||
| DB_info | Database | AceView | gene | 3O548 | |||||
| WormQTL | gene | WBGene00012097 | |||||||
| WormFlux | gene | WBGene00012097 | |||||||
| NDB | locus_tag | CELE_T27E9.7 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00012097|UniProtKB=G5EFG4 | |||||||
| family | PTHR19211 | ||||||||
| NCBI | gene | 176771 | |||||||
| RefSeq | protein | NM_067378.5 | |||||||
| TREEFAM | TREEFAM_ID | TF105208 | |||||||
| TrEMBL | UniProtAcc | G5EFG4 | |||||||
| UniProt_GCRP | UniProtAcc | G5EFG4 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:53 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| 2 | 21 Jun 2007 14:37:04 | WBPerson2970 | Name_change | CGC_name | abcf-2 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | abcf | ||||||||
| Allele (81) | |||||||||
| Strain | WBStrain00002791 | ||||||||
| WBStrain00036905 | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00018135 | ||||||||
| 00018136 | |||||||||
| 00018137 | |||||||||
| 00119280 | |||||||||
| 00119281 | |||||||||
| Contained_in_operon | CEOP3792 | ||||||||
| Ortholog (48) | |||||||||
| Paralog | WBGene00006512 | Caenorhabditis elegans | From_analysis | Panther | |||||
| WormBase-Compara | |||||||||
| WBGene00018339 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WormBase-Compara | |||||||||
| Structured_description | Automated_description | Predicted to enable ATP binding activity. Expressed in head. Is an ortholog of human ABCF2 (ATP binding cassette subfamily F member 2) and ABCF2-H2BK1 (ABCF2-H2BK1 readthrough). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | T27E9.7 | |||||||
| Corresponding_transcript | T27E9.7.1 | ||||||||
| Other_sequence (129) | |||||||||
| Associated_feature (14) | |||||||||
| Experimental_info | RNAi_result | WBRNAi00036041 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00006046 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00019348 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00054330 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00000871 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00054332 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Chronogram1644 | ||||||||
| Chronogram1952 | |||||||||
| Expr6794 | |||||||||
| Expr6795 | |||||||||
| Expr1027963 | |||||||||
| Expr1035340 | |||||||||
| Expr1157877 | |||||||||
| Expr2009075 | |||||||||
| Expr2027311 | |||||||||
| Drives_construct | WBCnstr00003318 | ||||||||
| WBCnstr00004576 | |||||||||
| Microarray_results (24) | |||||||||
| Expression_cluster (150) | |||||||||
| Interaction (201) | |||||||||
| Map_info | Map | III | Position | 21.2169 | Error | 0.000229 | |||
| Positive | Positive_clone | T27E9 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00027644 | ||||||||
| WBPaper00031484 | |||||||||
| WBPaper00038491 | |||||||||
| WBPaper00055090 | |||||||||
| WBPaper00064064 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
