WormBase Tree Display for Gene: WBGene00006512
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| WBGene00006512 | SMap | S_parent | Sequence | F18E2 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | abcf-1 | Paper_evidence | WBPaper00028961 | |||||
| Sequence_name | F18E2.2 | ||||||||
| Molecular_name | F18E2.2 | ||||||||
| F18E2.2.1 | |||||||||
| CE05663 | |||||||||
| Other_name | tag-167 | Person_evidence | WBPerson201 | ||||||
| CELE_F18E2.2 | Accession_evidence | NDB | BX284605 | ||||||
| Public_name | abcf-1 | ||||||||
| DB_info | Database | AceView | gene | 5N242 | |||||
| WormQTL | gene | WBGene00006512 | |||||||
| WormFlux | gene | WBGene00006512 | |||||||
| NDB | locus_tag | CELE_F18E2.2 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00006512|UniProtKB=Q19554 | |||||||
| family | PTHR19211 | ||||||||
| NCBI | gene | 179748 | |||||||
| RefSeq | protein | NM_073791.6 | |||||||
| TREEFAM | TREEFAM_ID | TF105207 | |||||||
| TrEMBL | UniProtAcc | Q19554 | |||||||
| UniProt_GCRP | UniProtAcc | Q19554 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 07 Apr 2004 11:29:40 | WBPerson1971 | Event | Imported | Initial conversion from geneace | ||
| 2 | 21 Jun 2007 14:37:04 | WBPerson2970 | Name_change | CGC_name | abcf-1 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | abcf | ||||||||
| Allele (33) | |||||||||
| Strain | WBStrain00001115 | ||||||||
| WBStrain00001465 | |||||||||
| WBStrain00035874 | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00065140 | ||||||||
| 00065141 | |||||||||
| 00065142 | |||||||||
| 00114169 | |||||||||
| 00114170 | |||||||||
| Ortholog (41) | |||||||||
| Paralog | WBGene00018339 | Caenorhabditis elegans | From_analysis | Panther | |||||
| WormBase-Compara | |||||||||
| WBGene00012097 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WormBase-Compara | |||||||||
| Structured_description | Automated_description | Predicted to enable ATP binding activity. Is an ortholog of human ABCF1 (ATP binding cassette subfamily F member 1). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | F18E2.2 | |||||||
| Corresponding_transcript | F18E2.2.1 | ||||||||
| Other_sequence (79) | |||||||||
| Associated_feature | WBsf653243 | ||||||||
| WBsf655600 | |||||||||
| WBsf234722 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00013505 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00085671 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00044942 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00031101 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Chronogram1391 | ||||||||
| Chronogram1967 | |||||||||
| Expr5789 | |||||||||
| Expr1028494 | |||||||||
| Expr1032667 | |||||||||
| Expr1148910 | |||||||||
| Expr2009074 | |||||||||
| Expr2027310 | |||||||||
| Drives_construct | WBCnstr00002028 | ||||||||
| WBCnstr00002029 | |||||||||
| WBCnstr00004200 | |||||||||
| WBCnstr00034331 | |||||||||
| Construct_product | WBCnstr00034331 | ||||||||
| Microarray_results (21) | |||||||||
| Expression_cluster (141) | |||||||||
| Interaction (19) | |||||||||
| Map_info | Map | V | Position | 4.64058 | Error | 0.011833 | |||
| Positive | Positive_clone | F18E2 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Mapping_data | Multi_point | 4379 | |||||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00027644 | ||||||||
| WBPaper00038491 | |||||||||
| WBPaper00055090 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
