WormBase Tree Display for Gene: WBGene00011857

WBGene00011857 SMap: S_parent: Sequence: T20D3
  Identity: Version: 3
    Name: CGC_name: coa-4 Person_evidence: WBPerson117
      Sequence_name: T20D3.3
      Molecular_name: T20D3.3a
        T20D3.3a.1
        CE28683
        T20D3.3b
        CE38418
        T20D3.3b.1
      Other_name: CELE_T20D3.3 Accession_evidence: NDB BX284604
      Public_name: coa-4
    DB_info: Database: AceView gene 4K98
        WormQTL gene WBGene00011857
        WormFlux gene WBGene00011857
        NDB locus_tag CELE_T20D3.3
        NCBI gene 177761
        RefSeq protein NM_001383161.2
            NM_001028220.5
        TREEFAM TREEFAM_ID TF317820
        TrEMBL UniProtAcc Q565B4
            O01255
        UniProt_GCRP UniProtAcc O01255
    Species: Caenorhabditis elegans
    History: Version_change: 1 26 May 2004 16:54:53 WBPerson1971 Event: Imported: Initial conversion from CDS class of WS125
        2 05 Sep 2017 13:25:30 WBPerson2970 Name_change: CGC_name: coa-4
        3 06 Mar 2018 14:41:50 WBPerson4025 Event: Split_into: WBGene00303026
      Split_into: WBGene00303026
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: coa
    Allele (33)
    RNASeq_FPKM (74)
    Contained_in_operon: CEOP5626
    Ortholog (22)
    Structured_description: Automated_description: Enriched in ASER; germ line; and somatic gonad precursor based on RNA-seq studies. Is affected by several genes including daf-2; let-60; and hsf-1 based on microarray and RNA-seq studies. Is affected by paraquat; Cry5B; and silicon dioxide nanoparticle based on RNA-seq and microarray studies. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: T20D3.3a
      T20D3.3b
    Corresponding_CDS_history: T20D3.3:wp17
      T20D3.3:wp57
      T20D3.3:wp141
      T20D3.3c:wp264
    Corresponding_transcript: T20D3.3a.1
      T20D3.3b.1
    Associated_feature: WBsf652052
      WBsf652053
      WBsf652054
      WBsf668149
      WBsf981802
      WBsf997401
      WBsf230553
      WBsf230554
  Experimental_info: RNAi_result: WBRNAi00061642 Inferred_automatically: RNAi_primary
      WBRNAi00035700 Inferred_automatically: RNAi_primary
      WBRNAi00053613 Inferred_automatically: RNAi_primary
      WBRNAi00081675 Inferred_automatically: RNAi_primary
      WBRNAi00018901 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr1023264
      Expr1035223
      Expr1157171
      Expr2006285
      Expr2024502
    Drives_construct: WBCnstr00030331
    Construct_product: WBCnstr00030331
    Microarray_results (31)
    Expression_cluster (99)
    Interaction (19)
  Map_info: Map: IV Position: 4.18357
    Positive: Positive_clone: T20D3 Inferred_automatically: From sequence, transcript, pseudogene data
    Pseudo_map_position
  Reference: WBPaper00055090
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene