WormBase Tree Display for Gene: WBGene00011758
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| WBGene00011758 | SMap | S_parent | Sequence | T13H5 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 3 | |||||||
| Name | CGC_name | prp-9 | |||||||
| Sequence_name | T13H5.4 | ||||||||
| Molecular_name | T13H5.4 | ||||||||
| T13H5.4.1 | |||||||||
| CE23981 | |||||||||
| Other_name | phi-8 | Person_evidence | WBPerson2582 | ||||||
| CELE_T13H5.4 | Accession_evidence | NDB | BX284602 | ||||||
| Public_name | prp-9 | ||||||||
| DB_info | Database | AceView | gene | 2I814 | |||||
| WormQTL | gene | WBGene00011758 | |||||||
| WormFlux | gene | WBGene00011758 | |||||||
| NDB | locus_tag | CELE_T13H5.4 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00011758|UniProtKB=Q22469 | |||||||
| family | PTHR12786 | ||||||||
| NCBI | gene | 174364 | |||||||
| RefSeq | protein | NM_063398.8 | |||||||
| TREEFAM | TREEFAM_ID | TF315227 | |||||||
| TrEMBL | UniProtAcc | Q22469 | |||||||
| UniProt_GCRP | UniProtAcc | Q22469 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:53 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| 2 | 17 Mar 2005 13:54:35 | WBPerson2970 | Name_change | Other_name | phi-8 | ||||
| 3 | 11 Mar 2021 09:37:10 | WBPerson1983 | Name_change | CGC_name | prp-9 | ||||
| Other_name | phi-8 | ||||||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | prp | ||||||||
| Allele (27) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation (11) | |||||||||
| Ortholog (38) | |||||||||
| Paralog | WBGene00009996 | Caenorhabditis elegans | From_analysis | Panther | |||||
| WormBase-Compara | |||||||||
| Structured_description | Automated_description | Predicted to enable RNA binding activity. Predicted to be involved in mRNA splicing, via spliceosome. Predicted to be located in nucleus. Predicted to be part of spliceosomal complex. Is an ortholog of human SF3A3 (splicing factor 3a subunit 3). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | T13H5.4 | |||||||
| Corresponding_transcript | T13H5.4.1 | ||||||||
| Other_sequence (57) | |||||||||
| Associated_feature | WBsf650334 | ||||||||
| WBsf665821 | |||||||||
| WBsf988758 | |||||||||
| WBsf223510 | |||||||||
| Experimental_info | RNAi_result (30) | ||||||||
| Expr_pattern | Expr1017867 | ||||||||
| Expr1035175 | |||||||||
| Expr1156884 | |||||||||
| Expr2006164 | |||||||||
| Expr2024380 | |||||||||
| Drives_construct | WBCnstr00030411 | ||||||||
| Construct_product | WBCnstr00030411 | ||||||||
| Microarray_results (18) | |||||||||
| Expression_cluster (97) | |||||||||
| Interaction (240) | |||||||||
| Map_info | Positive | Positive_clone | T13H5 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | II | 0.814731 | |||||||
| Reference | WBPaper00038491 | ||||||||
| WBPaper00055090 | |||||||||
| Method | Gene |
