WormBase Tree Display for Gene: WBGene00011668
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WBGene00011668 | SMap | S_parent | Sequence | T09F5 | |||
---|---|---|---|---|---|---|---|
Identity | Version | 2 | |||||
Name | CGC_name | clec-47 | Person_evidence | WBPerson655 | |||
Sequence_name | T09F5.9 | ||||||
Molecular_name | T09F5.9 | ||||||
T09F5.9.1 | |||||||
CE13537 | |||||||
Other_name | CELE_T09F5.9 | Accession_evidence | NDB | BX284605 | |||
Public_name | clec-47 | ||||||
DB_info | Database | AceView | gene | 5P657 | |||
WormQTL | gene | WBGene00011668 | |||||
WormFlux | gene | WBGene00011668 | |||||
NDB | locus_tag | CELE_T09F5.9 | |||||
Panther | gene | CAEEL|WormBase=WBGene00011668|UniProtKB=O18076 | |||||
family | PTHR22802 | ||||||
NCBI | gene | 180025 | |||||
RefSeq | protein | NM_074343.7 | |||||
TrEMBL | UniProtAcc | O18076 | |||||
UniProt_GCRP | UniProtAcc | O18076 | |||||
Species | Caenorhabditis elegans | ||||||
History | Version_change (2) | ||||||
Status | Live | ||||||
Gene_info | Biotype | SO:0001217 | |||||
Gene_class | clec | ||||||
Allele | WBVar02157478 | Inferred_automatically | From strain object: PS8825 | ||||
WBVar02148071 | |||||||
WBVar02146758 | |||||||
WBVar01500212 | |||||||
WBVar01500213 | |||||||
WBVar01499299 | |||||||
WBVar01072144 | |||||||
WBVar01072145 | |||||||
WBVar01072146 | |||||||
WBVar01499316 | |||||||
Strain | WBStrain00050973 | ||||||
RNASeq_FPKM (74) | |||||||
GO_annotation | 00031367 | ||||||
00031368 | |||||||
00031369 | |||||||
00106381 | |||||||
Ortholog (29) | |||||||
Paralog (71) | |||||||
Structured_description | Concise_description | clec-47 encodes a C-type lectin; clec-47 expression is upregulated in response to stressors including ionizing radiation and bacterial infection. | Paper_evidence | WBPaper00030985 | |||
WBPaper00032454 | |||||||
Curator_confirmed | WBPerson1843 | ||||||
Date_last_updated | 29 Aug 2011 00:00:00 | ||||||
Automated_description | Predicted to enable carbohydrate binding activity. Involved in response to gamma radiation. Predicted to be located in external side of plasma membrane. | Paper_evidence | WBPaper00065943 | ||||
Curator_confirmed | WBPerson324 | ||||||
WBPerson37462 | |||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||
Molecular_info | Corresponding_CDS | T09F5.9 | |||||
Corresponding_transcript | T09F5.9.1 | ||||||
Associated_feature | WBsf233005 | ||||||
Experimental_info | RNAi_result | WBRNAi00052979 | Inferred_automatically | RNAi_primary | |||
WBRNAi00018515 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00035402 | Inferred_automatically | RNAi_primary | |||||
Expr_pattern | Expr1023896 | ||||||
Expr1156585 | |||||||
Expr2010179 | |||||||
Expr2028421 | |||||||
Drives_construct | WBCnstr00030485 | ||||||
Construct_product | WBCnstr00030485 | ||||||
Microarray_results (17) | |||||||
Expression_cluster (337) | |||||||
Interaction | WBInteraction000502618 | ||||||
WBInteraction000571194 | |||||||
Map_info | Map | V | Position | 7.48976 | |||
Positive | Positive_clone | T09F5 | Inferred_automatically | From sequence, transcript, pseudogene data | |||
Pseudo_map_position | |||||||
Reference (11) | |||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||
Method | Gene |