WormBase Tree Display for Gene: WBGene00011639

WBGene00011639 SMap: S_parent: Sequence: T09A5
  Identity: Version: 2
    Name: CGC_name: ztf-17 Person_evidence: WBPerson1997
      Sequence_name: T09A5.12
      Molecular_name: T09A5.12
        T09A5.12.1
        CE44970
        T09A5.12.2
      Other_name: CELE_T09A5.12 Accession_evidence: NDB BX284602
      Public_name: ztf-17
    DB_info: Database: AceView gene 2I158
        WormQTL gene WBGene00011639
        WormFlux gene WBGene00011639
        NDB locus_tag CELE_T09A5.12
        Panther gene CAEEL|WormBase=WBGene00011639|UniProtKB=P45972
          family PTHR14003
        NCBI gene 174269
        RefSeq protein NM_063255.8
        SwissProt UniProtAcc P45972
        TREEFAM TREEFAM_ID TF350758
        UniProt_GCRP UniProtAcc P45972
    Species: Caenorhabditis elegans
    History: Version_change: 1 26 May 2004 16:54:52 WBPerson1971 Event: Imported: Initial conversion from CDS class of WS125
        2 18 Apr 2008 09:32:24 WBPerson2970 Name_change: CGC_name: ztf-17
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: ztf
    Allele (49)
    RNASeq_FPKM (74)
    GO_annotation: 00046229
      00046230
      00046231
      00046232
      00046233
      00046234
      00046235
      00046236
      00046237
    Contained_in_operon: CEOP2764
    Ortholog (28)
    Paralog: WBGene00018794 Caenorhabditis elegans From_analysis: TreeFam
    Structured_description: Automated_description: Enables RNA polymerase II transcription regulatory region sequence-specific DNA binding activity. Predicted to be involved in regulation of transcription by RNA polymerase II. Predicted to be part of PcG protein complex and transcription regulator complex. Expressed in body wall musculature; gonad; intestine; pharynx; and ventral nerve cord. Is an ortholog of human ZFP42 (ZFP42 zinc finger protein). Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: T09A5.12
    Corresponding_CDS_history: T09A5.12:wp214
    Corresponding_transcript: T09A5.12.1
      T09A5.12.2
    Other_sequence (16)
    Associated_feature: WBsf665745
      WBsf978511
      WBsf223407
      WBsf223408
      WBsf223409
      WBsf223410
    Transcription_factor: WBTranscriptionFactor000850
  Experimental_info: RNAi_result: WBRNAi00018485 Inferred_automatically: RNAi_primary
      WBRNAi00081122 Inferred_automatically: RNAi_primary
      WBRNAi00107436 Inferred_automatically: RNAi_primary
      WBRNAi00066602 Inferred_automatically: RNAi_primary
      WBRNAi00052917 Inferred_automatically: RNAi_primary
      WBRNAi00002356 Inferred_automatically: RNAi_primary
      WBRNAi00035372 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr7662
      Expr1025149
      Expr1035127
      Expr1156519
      Expr2018190
      Expr2036327
    Drives_construct: WBCnstr00012807
    Construct_product: WBCnstr00017973
    Microarray_results (23)
    Expression_cluster (107)
    Interaction (28)
  Map_info: Map: II Position: 0.592761 Error: 0.001218
    Positive: Positive_clone: T09A5 Inferred_automatically: From sequence, transcript, pseudogene data
    Pseudo_map_position
  Reference: WBPaper00034547
    WBPaper00034662
    WBPaper00039702
    WBPaper00045320
    WBPaper00058128
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene