WormBase Tree Display for Gene: WBGene00011537
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WBGene00011537 | SMap | S_parent | Sequence | T06E4 | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 2 | |||||||
Name | CGC_name | idpc-7 | Person_evidence | WBPerson1820 | |||||
Sequence_name | T06E4.10 | ||||||||
Molecular_name | T06E4.10 | ||||||||
T06E4.10.1 | |||||||||
CE41259 | |||||||||
Other_name | CELE_T06E4.10 | Accession_evidence | NDB | BX284605 | |||||
Public_name | idpc-7 | ||||||||
DB_info | Database | AceView | gene | 5K96 | |||||
WormQTL | gene | WBGene00011537 | |||||||
WormFlux | gene | WBGene00011537 | |||||||
NDB | locus_tag | CELE_T06E4.10 | |||||||
Panther | gene | CAEEL|WormBase=WBGene00011537|UniProtKB=Q22264 | |||||||
family | PTHR40351 | ||||||||
NCBI | gene | 188180 | |||||||
RefSeq | protein | NM_073079.6 | |||||||
TrEMBL | UniProtAcc | Q22264 | |||||||
UniProt_GCRP | UniProtAcc | Q22264 | |||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 26 May 2004 16:54:52 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
2 | 04 Jan 2022 10:41:14 | WBPerson1983 | Name_change | CGC_name | idpc-7 | ||||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Gene_class | idpc | ||||||||
Allele (14) | |||||||||
RNASeq_FPKM (74) | |||||||||
Ortholog (18) | |||||||||
Paralog | WBGene00011535 | Caenorhabditis elegans | From_analysis | Panther | |||||
WBGene00011536 | Caenorhabditis elegans | From_analysis | Panther | ||||||
WBGene00077691 | Caenorhabditis elegans | From_analysis | Panther | ||||||
WBGene00044011 | Caenorhabditis elegans | From_analysis | Panther | ||||||
Structured_description | Concise_description | T06E4.10 encodes an uncharacterized protein that is proline- and alanine-rich and contains a predicted signal sequence; as loss of T06E4.10 results in no obvious defects, the precise role of its gene product in C. elegans development and/or behavior is not yet known. | Paper_evidence | WBPaper00005654 | |||||
WBPaper00025054 | |||||||||
Curator_confirmed | WBPerson1843 | ||||||||
Date_last_updated | 12 Feb 2007 00:00:00 | ||||||||
Automated_description | Enriched in arcade cell; intestine; and neurons based on RNA-seq and single-cell RNA-seq studies. Is affected by several genes including daf-16; skn-1; and daf-12 based on microarray; tiling array; and RNA-seq studies. Is affected by twenty chemicals including Ethanol; methylmercury hydroxide; and 1-methylnicotinamide based on RNA-seq and microarray studies. | Paper_evidence | WBPaper00065943 | ||||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
Molecular_info | Corresponding_CDS | T06E4.10 | |||||||
Corresponding_CDS_history | T06E4.10:wp177 | ||||||||
Corresponding_transcript | T06E4.10.1 | ||||||||
Other_sequence | FD515153.1 | ||||||||
CJC06194_1 | |||||||||
MIC00253_2 | |||||||||
CSC01401_1 | |||||||||
PPC02075_1 | |||||||||
Associated_feature | WBsf652927 | ||||||||
WBsf652928 | |||||||||
WBsf1000955 | |||||||||
WBsf234250 | |||||||||
WBsf234251 | |||||||||
Experimental_info | RNAi_result | WBRNAi00018297 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00052652 | Inferred_automatically | RNAi_primary | |||||||
Expr_pattern | Expr1011353 | ||||||||
Expr1035087 | |||||||||
Expr1156256 | |||||||||
Expr2005933 | |||||||||
Expr2024148 | |||||||||
Drives_construct | WBCnstr00030578 | ||||||||
Construct_product | WBCnstr00030578 | ||||||||
Microarray_results (11) | |||||||||
Expression_cluster (170) | |||||||||
Interaction (75) | |||||||||
Map_info | Map | V | Position | 2.0564 | |||||
Positive | Positive_clone | T06E4 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
Pseudo_map_position | |||||||||
Reference | WBPaper00064648 | ||||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
Method | Gene |