WormBase Tree Display for Gene: WBGene00011273
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| WBGene00011273 | SMap | S_parent | Sequence | R53 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | Sequence_name | R53.4 | |||||||
| Molecular_name | R53.4 | ||||||||
| R53.4.1 | |||||||||
| CE03574 | |||||||||
| Other_name | ATP synthase subunit | Paper_evidence | WBPaper00006512 | ||||||
| CELE_R53.4 | Accession_evidence | NDB | BX284602 | ||||||
| Public_name | R53.4 | ||||||||
| DB_info | Database | AceView | gene | 2K258 | |||||
| WormQTL | gene | WBGene00011273 | |||||||
| WormFlux | gene | WBGene00011273 | |||||||
| NDB | locus_tag | CELE_R53.4 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00011273|UniProtKB=Q22021 | |||||||
| family | PTHR13080 | ||||||||
| NCBI | gene | 174554 | |||||||
| RefSeq | protein | NM_063751.10 | |||||||
| SwissProt | UniProtAcc | Q22021 | |||||||
| TREEFAM | TREEFAM_ID | TF342865 | |||||||
| UniProt_GCRP | UniProtAcc | Q22021 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:52 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele (17) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00073760 | ||||||||
| 00073761 | |||||||||
| 00073762 | |||||||||
| 00073763 | |||||||||
| 00073764 | |||||||||
| 00073765 | |||||||||
| 00073766 | |||||||||
| 00073767 | |||||||||
| 00073768 | |||||||||
| 00073769 | |||||||||
| Contained_in_operon | CEOP2470 | ||||||||
| CEOP2746 | |||||||||
| Ortholog (36) | |||||||||
| Structured_description | Concise_description | R53.4 encodes a mitochondrial ATP synthase subunit f homolog; R53.4 is predicated to be a member of the F(1)F(0)ATP synthase required for ATP synthesis; R53.4 is also required for expression of antimicrobial peptides in response to infection. | Paper_evidence | WBPaper00006488 | |||||
| Curator_confirmed | WBPerson1843 | ||||||||
| Date_last_updated | 22 Mar 2013 00:00:00 | ||||||||
| Automated_description | Predicted to contribute to proton-transporting ATP synthase activity, rotational mechanism. Predicted to be involved in proton motive force-driven mitochondrial ATP synthesis. Predicted to be located in mitochondrial membrane. Predicted to be part of mitochondrial proton-transporting ATP synthase complex. Is an ortholog of human ATP5MF (ATP synthase membrane subunit f). | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | R53.4 | |||||||
| Corresponding_transcript | R53.4.1 | ||||||||
| Other_sequence (114) | |||||||||
| Associated_feature | WBsf665263 | ||||||||
| WBsf665988 | |||||||||
| WBsf223733 | |||||||||
| Experimental_info | RNAi_result (16) | ||||||||
| Expr_pattern | Chronogram234 | ||||||||
| Chronogram1142 | |||||||||
| Expr1026227 | |||||||||
| Expr1034952 | |||||||||
| Expr1155674 | |||||||||
| Expr2005679 | |||||||||
| Expr2023895 | |||||||||
| Drives_construct | WBCnstr00030788 | ||||||||
| Construct_product | WBCnstr00030788 | ||||||||
| Microarray_results (22) | |||||||||
| Expression_cluster (132) | |||||||||
| Interaction (84) | |||||||||
| Map_info | Positive | Positive_clone | R53 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | II | 1.81596 | |||||||
| Reference | WBPaper00006488 | ||||||||
| WBPaper00006512 | |||||||||
| WBPaper00028999 | |||||||||
| WBPaper00029298 | |||||||||
| WBPaper00029435 | |||||||||
| WBPaper00031065 | |||||||||
| WBPaper00038491 | |||||||||
| WBPaper00049828 | |||||||||
| WBPaper00055090 | |||||||||
| WBPaper00063976 | |||||||||
| Method | Gene |
