WormBase Tree Display for Gene: WBGene00011240
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WBGene00011240 | SMap | S_parent | Sequence | CHROMOSOME_IV | ||
---|---|---|---|---|---|---|
Identity (6) | ||||||
Gene_info | Biotype | SO:0001217 | ||||
Gene_class | mask | |||||
Allele (132) | ||||||
Strain | WBStrain00002587 | |||||
WBStrain00002978 | ||||||
RNASeq_FPKM (74) | ||||||
GO_annotation | 00000370 | |||||
00000371 | ||||||
00073304 | ||||||
00073305 | ||||||
00073306 | ||||||
00073307 | ||||||
00073308 | ||||||
00118502 | ||||||
00118503 | ||||||
Contained_in_operon | CEOP4376 | |||||
Ortholog (43) | ||||||
Paralog | WBGene00002069 | Caenorhabditis elegans | From_analysis | Panther | ||
WBGene00006780 | Caenorhabditis elegans | From_analysis | Panther | |||
WBGene00007252 | Caenorhabditis elegans | From_analysis | Panther | |||
WBGene00012124 | Caenorhabditis elegans | From_analysis | Panther | |||
WBGene00011423 | Caenorhabditis elegans | From_analysis | WormBase-Compara | |||
Structured_description | Concise_description | The protein product of this gene is predicted to contain a glutamine/asparagine (Q/N)-rich ('prion') domain, by the algorithm of Michelitsch and Weissman (as of the WS77 release of WormBase, i.e., in wormpep77). | Paper_evidence | WBPaper00005068 | ||
WBPaper00012788 | ||||||
WBPaper00012830 | ||||||
WBPaper00012882 | ||||||
WBPaper00012897 | ||||||
WBPaper00013003 | ||||||
Curator_confirmed | WBPerson567 | |||||
Date_last_updated | 17 Jun 2004 00:00:00 | |||||
Automated_description | Predicted to enable RNA binding activity. Predicted to be located in cytoplasm. Expressed in head. Is an ortholog of human ANKHD1 (ankyrin repeat and KH domain containing 1); ANKHD1-EIF4EBP3 (ANKHD1-EIF4EBP3 readthrough); and ANKRD17 (ankyrin repeat domain 17). | Paper_evidence | WBPaper00065943 | |||
Curator_confirmed | WBPerson324 | |||||
WBPerson37462 | ||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | |||||
Date_last_updated | 29 Nov 2023 00:00:00 | |||||
Molecular_info | Corresponding_CDS | R11A8.7a | ||||
R11A8.7b | ||||||
R11A8.7c | ||||||
R11A8.7d | ||||||
R11A8.7e | ||||||
R11A8.7f | ||||||
R11A8.7g | ||||||
R11A8.7h | ||||||
R11A8.7i | ||||||
R11A8.7j | ||||||
Corresponding_CDS_history | R11A8.7a:wp199 | |||||
R11A8.7b:wp199 | ||||||
Corresponding_transcript (11) | ||||||
Other_sequence (12) | ||||||
Associated_feature (17) | ||||||
Experimental_info | RNAi_result (4) | |||||
Expr_pattern | Chronogram795 | |||||
Expr6503 | ||||||
Expr6504 | ||||||
Expr1016787 | ||||||
Expr1034935 | ||||||
Expr1155433 | ||||||
Expr2005578 | ||||||
Expr2023797 | ||||||
Drives_construct | WBCnstr00003146 | |||||
WBCnstr00004555 | ||||||
WBCnstr00030816 | ||||||
Construct_product | WBCnstr00030816 | |||||
Microarray_results (34) | ||||||
Expression_cluster (161) | ||||||
Interaction (36) | ||||||
Map_info | Map | IV | Position | 4.57953 | ||
Positive | Positive_clone | R11A8 | Inferred_automatically | From sequence, transcript, pseudogene data | ||
Pseudo_map_position | ||||||
Reference | WBPaper00038491 | |||||
WBPaper00043670 | ||||||
WBPaper00046432 | ||||||
WBPaper00055090 | ||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | ||||
Method | Gene |