WormBase Tree Display for Gene: WBGene00011207
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| WBGene00011207 | SMap | S_parent | Sequence | R10E8 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | Sequence_name | R10E8.1 | |||||||
| Molecular_name | R10E8.1a | ||||||||
| R10E8.1a.1 | |||||||||
| CE35603 | |||||||||
| R10E8.1a.2 | |||||||||
| R10E8.1a.3 | |||||||||
| R10E8.1a.4 | |||||||||
| R10E8.1a.5 | |||||||||
| R10E8.1a.6 | |||||||||
| R10E8.1b | |||||||||
| Other_name | CELE_R10E8.1 | Accession_evidence | NDB | BX284605 | |||||
| Public_name | R10E8.1 | ||||||||
| DB_info | Database | AceView | gene | 5S724 | |||||
| WormQTL | gene | WBGene00011207 | |||||||
| WormFlux | gene | WBGene00011207 | |||||||
| NDB | locus_tag | CELE_R10E8.1 | |||||||
| Panther | gene | CAEEL|EnsemblGenome=WBGene00011207|UniProtKB=O17998 | |||||||
| family | PTHR23014 | ||||||||
| NCBI | gene | 180194 | |||||||
| RefSeq | protein | NR_132534.1 | |||||||
| NM_001383486.2 | |||||||||
| TrEMBL | UniProtAcc | O17998 | |||||||
| UniProt_GCRP | UniProtAcc | O17998 | |||||||
| RNAcentral | URSid | URS000085DA73 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:52 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| 2 | 18 Sep 2014 13:29:28 | WBPerson4025 | Event | Acquires_merge | WBGene00194762 | ||||
| Acquires_merge | WBGene00194762 | ||||||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele (355) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Ortholog | WBGene00142261 | Caenorhabditis brenneri | From_analysis | WormBase-Compara | |||||
| Csp5_scaffold_04464.g32994 | Caenorhabditis sinica | From_analysis | WormBase-Compara | ||||||
| chrV_pilon.g17646 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| Paralog (176) | |||||||||
| Structured_description | Automated_description | Enriched in intestine based on tiling array; RNA-seq; and microarray studies. Is affected by several genes including daf-16; daf-2; and skn-1 based on microarray and RNA-seq studies. Is affected by eight chemicals including rotenone; Zidovudine; and paraquat based on RNA-seq and microarray studies. Is predicted to encode a protein with the following domains: Domain of unknown function DUF38/FTH, Caenorhabditis species and FTH domain. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | R10E8.1a | |||||||
| Corresponding_CDS_history | R10E8.1:wp109 | ||||||||
| R10E8.1:wp245 | |||||||||
| Corresponding_transcript | R10E8.1b | ||||||||
| R10E8.1a.1 | |||||||||
| R10E8.1a.2 | |||||||||
| R10E8.1a.3 | |||||||||
| R10E8.1a.4 | |||||||||
| R10E8.1a.5 | |||||||||
| R10E8.1a.6 | |||||||||
| Associated_feature | WBsf653529 | ||||||||
| WBsf1002848 | |||||||||
| WBsf1002849 | |||||||||
| WBsf1002850 | |||||||||
| WBsf1021431 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00001559 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00022422 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00051719 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1021700 | ||||||||
| Expr1034921 | |||||||||
| Expr1155386 | |||||||||
| Expr2005556 | |||||||||
| Expr2023775 | |||||||||
| Drives_construct | WBCnstr00030846 | ||||||||
| Construct_product | WBCnstr00030846 | ||||||||
| Microarray_results (21) | |||||||||
| Expression_cluster (121) | |||||||||
| Interaction | WBInteraction000314791 | ||||||||
| WBInteraction000359846 | |||||||||
| WBInteraction000437521 | |||||||||
| WBInteraction000453972 | |||||||||
| Map_info | Positive | Positive_clone | R10E8 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | V | 14.8349 | |||||||
| Method | Gene |
