WormBase Tree Display for Gene: WBGene00011176

WBGene00011176 SMap: S_parent: Sequence: R09E10
  Identity: Version: 1
    Name: Sequence_name: R09E10.6
      Molecular_name: R09E10.6
        R09E10.6.1
        CE06288
      Other_name: CELE_R09E10.6 Accession_evidence: NDB BX284604
      Public_name: R09E10.6
    DB_info: Database: AceView gene 4L58
        WormQTL gene WBGene00011176
        WormFlux gene WBGene00011176
        NDB locus_tag CELE_R09E10.6
        Panther gene CAEEL|WormBase=WBGene00011176|UniProtKB=Q21871
          family PTHR36947
        NCBI gene 177916
        RefSeq protein NM_069488.8
        TREEFAM TREEFAM_ID TF319328
        TrEMBL UniProtAcc Q21871
        UniProt_GCRP UniProtAcc Q21871
    Species: Caenorhabditis elegans
    History: Version_change: 1 26 May 2004 16:54:52 WBPerson1971 Event: Imported: Initial conversion from CDS class of WS125
    Status: Live
  Gene_info: Biotype: SO:0001217
    Allele (15)
    RNASeq_FPKM (74)
    Ortholog (21)
    Paralog: WBGene00007601 Caenorhabditis elegans From_analysis: TreeFam
            Inparanoid_8
            Panther
            WormBase-Compara
      WBGene00013170 Caenorhabditis elegans From_analysis: Panther
    Structured_description: Concise_description: R09E10.6 encodes a novel protein conserved amongst nematodes; R09E10.6 expression is enriched in the germline and loss of R09E10.6 activity via RNAi results in germ cell abnormalities, including oogenesis defects and abnormal syncytial germ cell compartments, that lead to reduced fertility. Paper_evidence: WBPaper00040537
            WBPaper00038381
            WBPaper00006390
            WBPaper00025054
          Curator_confirmed: WBPerson1843
          Date_last_updated: 21 Dec 2011 00:00:00
      Automated_description: Enriched in several structures, including AVK; germ line; hypodermis; sperm; and touch receptor neurons based on RNA-seq and single-cell RNA-seq studies. Is affected by several genes including daf-16; daf-2; and skn-1 based on microarray; RNA-seq; and proteomic studies. Is affected by thirty-three chemicals including Ethanol; 1-methylnicotinamide; and nicotinic acid based on RNA-seq and microarray studies. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: R09E10.6
    Corresponding_transcript: R09E10.6.1
    Other_sequence: FG621278.1
      CJC05025_1
      CR10356
      FG621208.1
      CRC03563_1
      CR00209
      CSC01152_1
      FG621236.1
      FD514394.1
      CBC04547_1
    Associated_feature: WBsf976950
      WBsf230711
      WBsf230712
  Experimental_info: RNAi_result: WBRNAi00085868 Inferred_automatically: RNAi_primary
      WBRNAi00022610 Inferred_automatically: RNAi_primary
      WBRNAi00034783 Inferred_automatically: RNAi_primary
      WBRNAi00051625 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr1014236
      Expr1155297
      Expr2005517
      Expr2023736
    Drives_construct: WBCnstr00030872
    Construct_product: WBCnstr00030872
    Microarray_results (18)
    Expression_cluster (271)
    Interaction (237)
  Map_info: Positive: Positive_clone: R09E10 Inferred_automatically: From sequence, transcript, pseudogene data
    Interpolated_map_position: IV 4.57202
  Reference: WBPaper00040537
  Method: Gene