WormBase Tree Display for Gene: WBGene00011163
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| WBGene00011163 | SMap | S_parent | Sequence | R09D1 | ||||||
|---|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 3 | ||||||||
| Name | CGC_name | chil-20 | Person_evidence | WBPerson261 | ||||||
| Sequence_name | R09D1.7 | |||||||||
| Molecular_name | R09D1.7 | |||||||||
| Other_name | CELE_R09D1.7 | Accession_evidence | NDB | BX284602 | ||||||
| Public_name | chil-20 | |||||||||
| DB_info | Database | AceView | gene | 2J746 | ||||||
| WormQTL | gene | WBGene00011163 | ||||||||
| WormFlux | gene | WBGene00011163 | ||||||||
| NDB | locus_tag | CELE_R09D1.7 | ||||||||
| NCBI | gene | 187737 | ||||||||
| Species | Caenorhabditis elegans | |||||||||
| History | Version_change | 1 | 26 May 2004 16:54:52 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | |||
| 2 | 25 Jan 2013 14:30:54 | WBPerson2970 | Name_change | CGC_name | chil-20 | |||||
| 3 | 21 Nov 2019 15:04:39 | WBPerson4025 | Event | Changed_class | CDS | Pseudogene | ||||
| Status | Live | |||||||||
| Gene_info | Biotype | SO:0000336 | ||||||||
| Gene_class | chil | |||||||||
| Allele (37) | ||||||||||
| RNASeq_FPKM (74) | ||||||||||
| Ortholog | WBGene00078009 | Caenorhabditis remanei | From_analysis | OMA | ||||||
| WBGene00077923 | Caenorhabditis remanei | From_analysis | OMA | |||||||
| WBGene00153933 | Caenorhabditis brenneri | From_analysis | TreeFam | |||||||
| WBGene00194423 | Caenorhabditis brenneri | From_analysis | TreeFam | |||||||
| WBGene00146738 | Caenorhabditis brenneri | From_analysis | TreeFam | |||||||
| WBGene00077959 | Caenorhabditis remanei | From_analysis | TreeFam | |||||||
| WBGene00077988 | Caenorhabditis remanei | From_analysis | TreeFam | |||||||
| WBGene00053712 | Caenorhabditis remanei | From_analysis | TreeFam | |||||||
| WBGene00053710 | Caenorhabditis remanei | From_analysis | TreeFam | |||||||
| Paralog (32) | ||||||||||
| Structured_description | Automated_description | Enriched in NSM; SMBDL; SMBDR; SMBVL; and SMBVR based on tiling array and single-cell RNA-seq studies. Is affected by several genes including age-1; let-60; and sir-2.1 based on microarray; tiling array; and RNA-seq studies. Is affected by five chemicals including Tunicamycin; paraquat; and cadmium based on microarray and RNA-seq studies. | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | |||||||||
| WBPerson37462 | ||||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | |||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | |||||||||
| Molecular_info | Corresponding_CDS_history | R09D1.7:wp274 | ||||||||
| Corresponding_pseudogene | R09D1.7 | |||||||||
| Other_sequence | CRC07196_1 | |||||||||
| CR08451 | ||||||||||
| Experimental_info | Expr_pattern | Expr1155288 | ||||||||
| Expr2009979 | ||||||||||
| Expr2028219 | ||||||||||
| Drives_construct | WBCnstr00030882 | |||||||||
| Construct_product | WBCnstr00030882 | |||||||||
| Microarray_results (13) | ||||||||||
| Expression_cluster (46) | ||||||||||
| Interaction | WBInteraction000282873 | |||||||||
| WBInteraction000432938 | ||||||||||
| Map_info | Map | II | Position | 1.43615 | ||||||
| Positive | Positive_clone | R09D1 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||||
| Pseudo_map_position | ||||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | ||||||||
| Method | Gene |
