WormBase Tree Display for Gene: WBGene00011146
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| WBGene00011146 | SMap | S_parent | Sequence | R08D7 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | pde-2 | Person_evidence | WBPerson433 | |||||
| Sequence_name | R08D7.6 | ||||||||
| Molecular_name | R08D7.6a | ||||||||
| R08D7.6a.1 | |||||||||
| CE44867 | |||||||||
| R08D7.6b | |||||||||
| CE44922 | |||||||||
| R08D7.6b.1 | |||||||||
| Other_name | CELE_R08D7.6 | Accession_evidence | NDB | BX284603 | |||||
| Public_name | pde-2 | ||||||||
| DB_info | Database (11) | ||||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:52 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| 2 | 10 Dec 2004 15:16:09 | WBPerson2970 | Name_change | CGC_name | pde-2 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | pde | ||||||||
| Allele (87) | |||||||||
| Strain | WBStrain00034936 | ||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation (44) | |||||||||
| Ortholog (35) | |||||||||
| Paralog | WBGene00008443 | Caenorhabditis elegans | From_analysis | Panther | |||||
| WormBase-Compara | |||||||||
| WBGene00020114 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WormBase-Compara | |||||||||
| WBGene00011433 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WormBase-Compara | |||||||||
| WBGene00022389 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WormBase-Compara | |||||||||
| WBGene00016328 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| Structured_description | Automated_description | Predicted to enable 3',5'-cyclic-nucleotide phosphodiesterase activity and protein homodimerization activity. Involved in several processes, including determination of adult lifespan; positive regulation of egg-laying behavior; and regulation of cGMP-mediated signaling. Predicted to be located in several cellular components, including mitochondrion; perinuclear region of cytoplasm; and synaptic membrane. Expressed in AFDL and AFDR. Is an ortholog of human PDE2A (phosphodiesterase 2A). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | R08D7.6a | |||||||
| R08D7.6b | |||||||||
| Corresponding_CDS_history | R08D7.6:wp110 | ||||||||
| R08D7.6a:wp214 | |||||||||
| R08D7.6b:wp214 | |||||||||
| R08D7.6c:wp214 | |||||||||
| Corresponding_transcript | R08D7.6a.1 | ||||||||
| R08D7.6b.1 | |||||||||
| Other_sequence (15) | |||||||||
| Associated_feature (15) | |||||||||
| Experimental_info | RNAi_result | WBRNAi00005081 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00017587 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00051546 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00034750 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Chronogram1818 | ||||||||
| Expr6483 | |||||||||
| Expr11358 | |||||||||
| Expr1010425 | |||||||||
| Expr1034903 | |||||||||
| Expr1155224 | |||||||||
| Expr2014795 | |||||||||
| Expr2033029 | |||||||||
| Drives_construct | WBCnstr00003415 | ||||||||
| WBCnstr00018801 | |||||||||
| WBCnstr00030894 | |||||||||
| Construct_product | WBCnstr00030894 | ||||||||
| Microarray_results (26) | |||||||||
| Expression_cluster (141) | |||||||||
| Interaction (62) | |||||||||
| Map_info | Map | III | Position | 0.056747 | Error | 0.000879 | |||
| Positive | Positive_clone | R08D7 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference (20) | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
