WormBase Tree Display for Gene: WBGene00011079
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WBGene00011079 | SMap | S_parent | Sequence | R07B1 | |||
---|---|---|---|---|---|---|---|
Identity | Version | 2 | |||||
Name | Sequence_name | R07B1.7 | |||||
Molecular_name | R07B1.7 | ||||||
R07B1.7.1 | |||||||
CE52883 | |||||||
Other_name | CELE_R07B1.7 | Accession_evidence | NDB | BX284606 | |||
Public_name | R07B1.7 | ||||||
DB_info | Database | AceView | gene | XK487 | |||
WormQTL | gene | WBGene00011079 | |||||
WormFlux | gene | WBGene00011079 | |||||
NDB | locus_tag | CELE_R07B1.7 | |||||
Panther | gene | CAEEL|WormBase=WBGene00011079|UniProtKB=Q09421 | |||||
family | PTHR21629 | ||||||
NCBI | gene | 187648 | |||||
RefSeq | protein | NM_077254.4 | |||||
SwissProt | UniProtAcc | Q09421 | |||||
UniProt_GCRP | UniProtAcc | Q09421 | |||||
Species | Caenorhabditis elegans | ||||||
History | Version_change (2) | ||||||
Split_into | WBGene00138711 | ||||||
Status | Live | ||||||
Gene_info | Biotype | SO:0001217 | |||||
Allele | WBVar01786889 | ||||||
WBVar02069039 | |||||||
WBVar01177129 | |||||||
WBVar01177130 | |||||||
WBVar02139911 | |||||||
WBVar01888010 | |||||||
WBVar01888011 | |||||||
WBVar01498960 | |||||||
WBVar01500067 | |||||||
RNASeq_FPKM (74) | |||||||
Contained_in_operon | CEOPX180 | ||||||
CEOP2738 | |||||||
Ortholog (13) | |||||||
Paralog | WBGene00011077 | Caenorhabditis elegans | From_analysis | Panther | |||
WBGene00011078 | Caenorhabditis elegans | From_analysis | Panther | ||||
WBGene00012571 | Caenorhabditis elegans | From_analysis | Panther | ||||
WBGene00011877 | Caenorhabditis elegans | From_analysis | Panther | ||||
WBGene00019306 | Caenorhabditis elegans | From_analysis | Panther | ||||
WBGene00012570 | Caenorhabditis elegans | From_analysis | Panther | ||||
WBGene00016276 | Caenorhabditis elegans | From_analysis | Panther | ||||
WBGene00138711 | Caenorhabditis elegans | From_analysis | Panther | ||||
WormBase-Compara | |||||||
Structured_description | Automated_description | Enriched in OLL; PVD; and coelomocyte based on microarray; tiling array; and single-cell RNA-seq studies. Is affected by several genes including daf-16; daf-2; and daf-12 based on microarray; tiling array; and RNA-seq studies. Is affected by nine chemicals including methylmercury hydroxide; multi-walled carbon nanotube; and metformin based on RNA-seq and microarray studies. Is predicted to encode a protein with the following domain: C6 domain. | Paper_evidence | WBPaper00065943 | |||
Curator_confirmed | WBPerson324 | ||||||
WBPerson37462 | |||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||
Molecular_info | Corresponding_CDS | R07B1.7 | |||||
Corresponding_CDS_history | R07B1.7:wp194 | ||||||
R07B1.7:wp268 | |||||||
Corresponding_transcript | R07B1.7.1 | ||||||
Associated_feature | WBsf1006557 | ||||||
Experimental_info | RNAi_result | WBRNAi00051416 | Inferred_automatically | RNAi_primary | |||
Expr_pattern | Expr1020570 | ||||||
Expr1155106 | |||||||
Expr2005442 | |||||||
Expr2023663 | |||||||
Microarray_results | SMD_R07B1.7 | ||||||
186791_at | |||||||
Aff_R07B1.7 | |||||||
GPL14144_R07B1.7_331-390_0.970_1_A | |||||||
GPL19516_CGZ0031203 | |||||||
GPL21109_R07B1.7 | |||||||
GPL3518_CE01633 | |||||||
GPL8673_R07B1_7P00121 | |||||||
Expression_cluster (90) | |||||||
Interaction (6) | |||||||
Map_info | Positive | Positive_clone | R07B1 | Inferred_automatically | From sequence, transcript, pseudogene data | ||
Interpolated_map_position | X | 1.73042 | |||||
Method | Gene |