WormBase Tree Display for Gene: WBGene00010896
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WBGene00010896 | SMap | S_parent | Sequence | M28 | |||
---|---|---|---|---|---|---|---|
Identity | Version | 3 | |||||
Name | CGC_name | snu-13 | |||||
Sequence_name | M28.5 | ||||||
Molecular_name | M28.5 | ||||||
M28.5.1 | |||||||
CE02283 | |||||||
Other_name | phi-9 | Person_evidence | WBPerson2582 | ||||
CELE_M28.5 | Accession_evidence | NDB | BX284602 | ||||
Public_name | snu-13 | ||||||
DB_info | Database | AceView | gene | 2K948 | |||
WormQTL | gene | WBGene00010896 | |||||
WormFlux | gene | WBGene00010896 | |||||
NDB | locus_tag | CELE_M28.5 | |||||
Panther | gene | CAEEL|WormBase=WBGene00010896|UniProtKB=Q21568 | |||||
family | PTHR23105 | ||||||
NCBI | gene | 174645 | |||||
RefSeq | protein | NM_001393180.1 | |||||
SwissProt | UniProtAcc | Q21568 | |||||
TREEFAM | TREEFAM_ID | TF300184 | |||||
UniProt_GCRP | UniProtAcc | Q21568 | |||||
Species | Caenorhabditis elegans | ||||||
History | Version_change (3) | ||||||
Status | Live | ||||||
Gene_info | Biotype | SO:0001217 | |||||
Gene_class | snu | ||||||
Allele (16) | |||||||
RNASeq_FPKM (74) | |||||||
GO_annotation (18) | |||||||
Contained_in_operon | CEOP2500 | ||||||
Ortholog (40) | |||||||
Paralog | WBGene00004412 | Caenorhabditis elegans | From_analysis | Panther | |||
WBGene00004419 | Caenorhabditis elegans | From_analysis | Panther | ||||
WBGene00009993 | Caenorhabditis elegans | From_analysis | Panther | ||||
WBGene00012964 | Caenorhabditis elegans | From_analysis | Inparanoid_8 | ||||
Panther | |||||||
WBGene00017997 | Caenorhabditis elegans | From_analysis | Panther | ||||
Structured_description | Automated_description | Predicted to enable RNA binding activity. Predicted to be involved in mRNA splicing, via spliceosome; maturation of LSU-rRNA; and maturation of SSU-rRNA. Predicted to be located in nucleolus. Predicted to be part of ribonucleoprotein complex. Is an ortholog of human SNU13 (small nuclear ribonucleoprotein 13). | Paper_evidence | WBPaper00065943 | |||
Curator_confirmed | WBPerson324 | ||||||
WBPerson37462 | |||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||
Molecular_info (4) | |||||||
Experimental_info | RNAi_result (11) | ||||||
Expr_pattern | Expr1014225 | ||||||
Expr1034779 | |||||||
Expr1154736 | |||||||
Expr2005274 | |||||||
Expr2023493 | |||||||
Drives_construct | WBCnstr00031071 | ||||||
Construct_product | WBCnstr00031071 | ||||||
Microarray_results (22) | |||||||
Expression_cluster (175) | |||||||
Interaction (246) | |||||||
Map_info | Map | II | Position | 3.12292 | |||
Positive | Positive_clone | M28 | Inferred_automatically | From sequence, transcript, pseudogene data | |||
Pseudo_map_position | |||||||
Reference | WBPaper00031949 | ||||||
WBPaper00038491 | |||||||
WBPaper00049828 | |||||||
WBPaper00055090 | |||||||
WBPaper00062599 | |||||||
WBPaper00063976 | |||||||
WBPaper00064632 | |||||||
WBPaper00065012 | |||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||
Method | Gene |