WormBase Tree Display for Gene: WBGene00010725
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WBGene00010725 | SMap | S_parent | Sequence | K09E9 | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 3 | |||||||
Name | CGC_name | ergi-3 | Person_evidence | WBPerson141 | |||||
Sequence_name | K09E9.2 | ||||||||
Molecular_name | K09E9.2 | ||||||||
K09E9.2.1 | |||||||||
CE12012 | |||||||||
K09E9.2.2 | |||||||||
Other_name | erv-46 | Person_evidence | WBPerson887 | ||||||
CELE_K09E9.2 | Accession_evidence | NDB | BX284606 | ||||||
Public_name | ergi-3 | ||||||||
DB_info | Database | AceView | gene | XQ234 | |||||
WormQTL | gene | WBGene00010725 | |||||||
WormFlux | gene | WBGene00010725 | |||||||
NDB | locus_tag | CELE_K09E9.2 | |||||||
Panther | gene | CAEEL|WormBase=WBGene00010725|UniProtKB=Q93878 | |||||||
family | PTHR10984 | ||||||||
NCBI | gene | 181652 | |||||||
RefSeq | protein | NM_001383686.2 | |||||||
TREEFAM | TREEFAM_ID | TF300739 | |||||||
TrEMBL | UniProtAcc | Q93878 | |||||||
UniProt_GCRP | UniProtAcc | Q93878 | |||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 26 May 2004 16:54:51 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
2 | 15 Jun 2006 11:42:24 | WBPerson2970 | Name_change | CGC_name | erv-46 | ||||
3 | 04 Jan 2022 01:07:14 | WBPerson1983 | Name_change | CGC_name | ergi-3 | ||||
Other_name | erv-46 | ||||||||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Gene_class | ergi | ||||||||
Allele (55) | |||||||||
RNASeq_FPKM (74) | |||||||||
GO_annotation | 00086833 | ||||||||
00086834 | |||||||||
00086835 | |||||||||
00086836 | |||||||||
00086837 | |||||||||
00086838 | |||||||||
00086839 | |||||||||
00086840 | |||||||||
00086841 | |||||||||
00086842 | |||||||||
Contained_in_operon | CEOPX156 | ||||||||
Ortholog (35) | |||||||||
Paralog | WBGene00007668 | Caenorhabditis elegans | From_analysis (2) | ||||||
WBGene00022416 | Caenorhabditis elegans | From_analysis (2) | |||||||
Structured_description | Automated_description | Predicted to be involved in endoplasmic reticulum to Golgi vesicle-mediated transport and retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum. Predicted to be located in COPII-coated ER to Golgi transport vesicle; endoplasmic reticulum; and membrane. Expressed in alimentary muscle and vm1. Human ortholog(s) of this gene implicated in lung adenocarcinoma. Is an ortholog of human ERGIC3 (ERGIC and golgi 3). | Paper_evidence | WBPaper00065943 | |||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
Disease_info | Potential_model | DOID:3910 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:15927) | ||||
Molecular_info | Corresponding_CDS | K09E9.2 | |||||||
Corresponding_transcript | K09E9.2.1 | ||||||||
K09E9.2.2 | |||||||||
Other_sequence (49) | |||||||||
Associated_feature | WBsf654666 | ||||||||
WBsf671390 | |||||||||
WBsf238343 | |||||||||
WBsf238344 | |||||||||
Experimental_info | RNAi_result | WBRNAi00016924 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00050436 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00033370 | Inferred_automatically | RNAi_primary | |||||||
Expr_pattern | Expr3910 | ||||||||
Expr1015546 | |||||||||
Expr1034694 | |||||||||
Expr1154141 | |||||||||
Expr2011373 | |||||||||
Expr2029609 | |||||||||
Drives_construct | WBCnstr00011743 | ||||||||
WBCnstr00031194 | |||||||||
Construct_product | WBCnstr00031194 | ||||||||
Microarray_results (18) | |||||||||
Expression_cluster (117) | |||||||||
Interaction (27) | |||||||||
Map_info | Map | X | Position | 22.9312 | |||||
Positive | Positive_clone | K09E9 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
Pseudo_map_position | |||||||||
Reference (4) | |||||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
Method | Gene |