WormBase Tree Display for Gene: WBGene00010378
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WBGene00010378 | SMap | S_parent | Sequence | H12D21 | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 1 | |||||||
Name | Sequence_name | H12D21.2 | |||||||
Molecular_name | H12D21.2a | ||||||||
H12D21.2a.1 | |||||||||
CE36698 | |||||||||
H12D21.2b | |||||||||
CE46606 | |||||||||
H12D21.2b.1 | |||||||||
Other_name | CELE_H12D21.2 | Accession_evidence | NDB | BX284605 | |||||
Public_name | H12D21.2 | ||||||||
DB_info | Database | AceView | gene | 5P368 | |||||
WormQTL | gene | WBGene00010378 | |||||||
WormFlux | gene | WBGene00010378 | |||||||
NDB | locus_tag | CELE_H12D21.2 | |||||||
Panther | gene | CAEEL|WormBase=WBGene00010378|UniProtKB=G5EGK3 | |||||||
family | PTHR37977 | ||||||||
NCBI | gene | 186726 | |||||||
RefSeq | protein | NM_001392663.1 | |||||||
NM_001269699.1 | |||||||||
TREEFAM | TREEFAM_ID | TF322975 | |||||||
TrEMBL | UniProtAcc | G5EGK3 | |||||||
H2L2K1 | |||||||||
UniProt_GCRP | UniProtAcc | G5EGK3 | |||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 26 May 2004 16:54:51 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Allele (24) | |||||||||
RNASeq_FPKM (74) | |||||||||
Ortholog (20) | |||||||||
Paralog | WBGene00009390 | Caenorhabditis elegans | From_analysis | Panther | |||||
WBGene00012174 | Caenorhabditis elegans | From_analysis | Panther | ||||||
WBGene00019507 | Caenorhabditis elegans | From_analysis | Panther | ||||||
WBGene00015192 | Caenorhabditis elegans | From_analysis | Panther | ||||||
WBGene00013890 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
WormBase-Compara | |||||||||
Structured_description | Automated_description | Enriched in AIN; arcade cell; germ line; neurons; and pharyngeal-intestinal valve cell based on RNA-seq; single-cell RNA-seq; and microarray studies. Is affected by several genes including daf-16; daf-2; and skn-1 based on RNA-seq and microarray studies. Is affected by nine chemicals including methylmercuric chloride; Rifampin; and allantoin based on microarray and RNA-seq studies. | Paper_evidence | WBPaper00065943 | |||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
Molecular_info | Corresponding_CDS | H12D21.2a | |||||||
H12D21.2b | |||||||||
Corresponding_CDS_history | H12D21.2:wp125 | ||||||||
Corresponding_transcript | H12D21.2a.1 | ||||||||
H12D21.2b.1 | |||||||||
Associated_feature | WBsf1020941 | ||||||||
Experimental_info | RNAi_result | WBRNAi00016243 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00049373 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00022505 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00038052 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00049372 | Inferred_automatically | RNAi_primary | |||||||
Expr_pattern | Expr1015863 | ||||||||
Expr1153106 | |||||||||
Expr2004548 | |||||||||
Expr2022774 | |||||||||
Drives_construct | WBCnstr00031456 | ||||||||
Construct_product | WBCnstr00031456 | ||||||||
Microarray_results | SMD_H12D21.2 | ||||||||
182441_s_at | |||||||||
Aff_H12D21.2 | |||||||||
Expression_cluster (58) | |||||||||
Interaction | WBInteraction000160209 | ||||||||
WBInteraction000254898 | |||||||||
WBInteraction000353984 | |||||||||
WBInteraction000354073 | |||||||||
WBInteraction000378338 | |||||||||
Map_info | Positive | Positive_clone | H12D21 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
Interpolated_map_position | V | 6.99768 | |||||||
Method | Gene |