WormBase Tree Display for Gene: WBGene00010317
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WBGene00010317 | SMap | S_parent | Sequence | F59B8 | |||
---|---|---|---|---|---|---|---|
Identity (6) | |||||||
Gene_info | Biotype | SO:0001217 | |||||
Gene_class | idh | ||||||
Allele (27) | |||||||
Strain (3) | |||||||
RNASeq_FPKM (74) | |||||||
GO_annotation (15) | |||||||
Ortholog (38) | |||||||
Paralog | WBGene00007942 | Caenorhabditis elegans | From_analysis | WormBase-Compara | |||
Structured_description | Concise_description | idh-1 encodes a predicted cytosolic isocitrate dehydrogenase; by homology, IDH-1 is predicted to catalyze the formation of alpha-ketoglutarate from isocitrate. | Curator_confirmed | WBPerson1843 | |||
Date_last_updated | 26 Oct 2011 00:00:00 | ||||||
Automated_description | Predicted to enable isocitrate dehydrogenase (NADP+) activity. Predicted to be involved in NADP metabolic process and isocitrate metabolic process. Predicted to be located in cytosol; mitochondrion; and peroxisome. Expressed in tail. Human ortholog(s) of this gene implicated in several diseases, including carcinoma (multiple); glioblastoma; and hematologic cancer (multiple). Is an ortholog of human IDH1 (isocitrate dehydrogenase (NADP(+)) 1). | Paper_evidence | WBPaper00065943 | ||||
Curator_confirmed | WBPerson324 | ||||||
WBPerson37462 | |||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS292 version of WormBase | ||||||
Date_last_updated | 24 Apr 2024 00:00:00 | ||||||
Disease_info | Potential_model | DOID:5016 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:5382) | ||
DOID:4928 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:5382) | ||||
DOID:3068 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:5382) | ||||
DOID:0050908 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:5382) | ||||
DOID:3910 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:5382) | ||||
DOID:3070 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:5382) | ||||
DOID:3907 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:5382) | ||||
DOID:417 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:5382) | ||||
DOID:9119 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:5382) | ||||
Molecular_info (4) | |||||||
Experimental_info | RNAi_result | WBRNAi00090634 | Inferred_automatically | RNAi_primary | |||
WBRNAi00080812 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00065271 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00016084 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00001636 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00033293 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00049155 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00113980 | Inferred_automatically | RNAi_primary | |||||
Expr_pattern | Chronogram1063 | ||||||
Chronogram1718 | |||||||
Expr6263 | |||||||
Expr6264 | |||||||
Expr1018358 | |||||||
Expr1034502 | |||||||
Expr1152898 | |||||||
Expr2012669 | |||||||
Expr2030905 | |||||||
Drives_construct | WBCnstr00003334 | ||||||
WBCnstr00004581 | |||||||
WBCnstr00031510 | |||||||
Construct_product | WBCnstr00031510 | ||||||
Microarray_results (25) | |||||||
Expression_cluster (221) | |||||||
Interaction (103) | |||||||
Map_info | Map | IV | Position | 4.24582 | Error | 0.002337 | |
Positive | Positive_clone | F59B8 | Inferred_automatically | From sequence, transcript, pseudogene data | |||
Pseudo_map_position | |||||||
Reference (11) | |||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||
Method | Gene |