WormBase Tree Display for Gene: WBGene00010295
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| WBGene00010295 | SMap | S_parent | Sequence | F59A1 | ||||||
|---|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 3 | ||||||||
| Name | CGC_name | fbxa-193 | Person_evidence | WBPerson655 | ||||||
| Sequence_name | F59A1.9 | |||||||||
| Molecular_name | F59A1.9 | |||||||||
| Other_name | CELE_F59A1.9 | Accession_evidence | NDB | BX284605 | ||||||
| Public_name | fbxa-193 | |||||||||
| DB_info | Database | AceView | gene | 5S132 | ||||||
| WormQTL | gene | WBGene00010295 | ||||||||
| NDB | locus_tag | CELE_F59A1.9 | ||||||||
| NCBI | gene | 186562 | ||||||||
| Species | Caenorhabditis elegans | |||||||||
| History | Version_change | 1 | 26 May 2004 16:54:51 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | |||
| 2 | 01 Mar 2007 11:55:19 | WBPerson2970 | Name_change | CGC_name | fbxa-193 | |||||
| 3 | 09 Sep 2010 12:10:25 | WBPerson4025 | Event | Changed_class | CDS | Pseudogene | ||||
| Status | Live | |||||||||
| Gene_info | Biotype | SO:0000336 | ||||||||
| Gene_class | fbxa | |||||||||
| Allele (47) | ||||||||||
| RNASeq_FPKM (74) | ||||||||||
| Contained_in_operon | CEOP5460 | |||||||||
| Ortholog | WBGene00037963 | Caenorhabditis briggsae | From_analysis | OrthoMCL | ||||||
| WBGene00037964 | Caenorhabditis briggsae | From_analysis | OrthoMCL | |||||||
| WBGene00038015 | Caenorhabditis briggsae | From_analysis | OrthoMCL | |||||||
| WBGene00038016 | Caenorhabditis briggsae | From_analysis | OrthoMCL | |||||||
| WBGene00027399 | Caenorhabditis briggsae | From_analysis | OrthoMCL | |||||||
| WBGene00036023 | Caenorhabditis briggsae | From_analysis | OrthoMCL | |||||||
| WBGene00025280 | Caenorhabditis briggsae | From_analysis | OrthoMCL | |||||||
| WBGene00027400 | Caenorhabditis briggsae | From_analysis | OrthoMCL | |||||||
| Structured_description | Automated_description | Enriched in several structures, including I5 neuron; cholinergic neurons; germ line; germline precursor cell; and head mesodermal cell based on RNA-seq and microarray studies. Is affected by several genes including daf-2; hsf-1; and eat-2 based on microarray; tiling array; and RNA-seq studies. Is affected by seven chemicals including rotenone; manganese chloride; and D-glucose based on RNA-seq studies. | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | |||||||||
| WBPerson37462 | ||||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | |||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | |||||||||
| Molecular_info | Corresponding_CDS_history | F59A1.9:wp195 | ||||||||
| F59A1.9:wp219 | ||||||||||
| Corresponding_pseudogene | F59A1.9 | |||||||||
| Associated_feature | WBsf669824 | |||||||||
| WBsf669825 | ||||||||||
| WBsf669826 | ||||||||||
| Experimental_info | Expr_pattern | Expr1026056 | ||||||||
| Microarray_results (13) | ||||||||||
| Expression_cluster (119) | ||||||||||
| Interaction (12) | ||||||||||
| Map_info | Map | V | Position | 12.9511 | Error | 0.003104 | ||||
| Positive | Positive_clone | F59A1 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||||
| Pseudo_map_position | ||||||||||
| Reference | WBPaper00044753 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | ||||||||
| Method | Gene |
