WormBase Tree Display for Gene: WBGene00010041
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WBGene00010041 | SMap | S_parent | Sequence | F54C9 | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 1 | |||||||
Name | Sequence_name | F54C9.3 | |||||||
Molecular_name | F54C9.3 | ||||||||
F54C9.3.1 | |||||||||
CE02253 | |||||||||
Other_name | CELE_F54C9.3 | Accession_evidence | NDB | BX284602 | |||||
Public_name | F54C9.3 | ||||||||
DB_info | Database | AceView | gene | 2I856 | |||||
WormQTL | gene | WBGene00010041 | |||||||
WormFlux | gene | WBGene00010041 | |||||||
NDB | locus_tag | CELE_F54C9.3 | |||||||
NCBI | gene | 174369 | |||||||
RefSeq | protein | NM_063408.7 | |||||||
TrEMBL | UniProtAcc | Q20753 | |||||||
UniProt_GCRP | UniProtAcc | Q20753 | |||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 26 May 2004 16:54:50 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Allele | WBVar01499702 | ||||||||
WBVar00372363 | |||||||||
WBVar01498435 | |||||||||
WBVar01429538 | |||||||||
WBVar01499423 | |||||||||
WBVar01498940 | |||||||||
RNASeq_FPKM (74) | |||||||||
Contained_in_operon | CEOP2732 | ||||||||
Ortholog (15) | |||||||||
Structured_description | Automated_description | Enriched in several structures, including AFD; germ line; head mesodermal cell; intestine; and lateral ganglion based on tiling array; RNA-seq; proteomic; single-cell RNA-seq; and microarray studies. Is affected by several genes including cyc-1; nuo-6; and atfs-1 based on microarray; RNA-seq; and tiling array studies. Is affected by twenty-one chemicals including hydrogen sulfide; 1-methylnicotinamide; and rotenone based on microarray and RNA-seq studies. Is predicted to encode a protein with the following domain: Phosphorylation site. | Paper_evidence | WBPaper00065943 | |||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS292 version of WormBase | ||||||||
Date_last_updated | 24 Apr 2024 00:00:00 | ||||||||
Molecular_info | Corresponding_CDS | F54C9.3 | |||||||
Corresponding_transcript | F54C9.3.1 | ||||||||
Other_sequence | CBC02710_1 | ||||||||
CRC10494_1 | |||||||||
CR04817 | |||||||||
CJC02350_1 | |||||||||
Associated_feature | WBsf650339 | ||||||||
WBsf223517 | |||||||||
WBsf223518 | |||||||||
Experimental_info | RNAi_result | WBRNAi00015591 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00048271 | Inferred_automatically | RNAi_primary | |||||||
WBRNAi00032764 | Inferred_automatically | RNAi_primary | |||||||
Expr_pattern (5) | |||||||||
Drives_construct | WBCnstr00031715 | ||||||||
Construct_product | WBCnstr00031715 | ||||||||
Microarray_results (18) | |||||||||
Expression_cluster (215) | |||||||||
Interaction (18) | |||||||||
Map_info | Positive | Positive_clone | F54C9 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
Interpolated_map_position | II | 0.81724 | |||||||
Method | Gene |