WormBase Tree Display for Gene: WBGene00009341

WBGene00009341 SMap: S_parent: Sequence: F32H2
  Identity: Version: 2
    Name: CGC_name: thoc-3
      Sequence_name: F32H2.4
      Molecular_name: F32H2.4
        F32H2.4.1
        CE42808
      Other_name: CELE_F32H2.4 Accession_evidence: NDB BX284601
      Public_name: thoc-3
    DB_info: Database (11)
    Species: Caenorhabditis elegans
    History: Version_change: 1 26 May 2004 16:54:50 WBPerson1971 Event: Imported: Initial conversion from CDS class of WS125
        2 20 Jul 2007 12:03:23 WBPerson2970 Name_change: CGC_name: thoc-3
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: thoc
    Allele (25)
    RNASeq_FPKM (74)
    GO_annotation: 00051510
      00051511
      00051512
      00117060
    Contained_in_operon: CEOP1520
    Ortholog (31)
    Structured_description: Concise_description: thoc-3 encodes the C. elegans ortholog of mammalian THOC3 and S. cerevisiae Tex1, a subunit of the THO complex involved in mRNP biogenesis as part of transcription elongation, mRNA maturation, and export. Paper_evidence: WBPaper00041879
          Curator_confirmed: WBPerson1843
          Date_last_updated: 09 Jan 2013 00:00:00
      Automated_description: Predicted to be involved in mRNA export from nucleus. Predicted to be part of THO complex part of transcription export complex. Is an ortholog of human THOC3 (THO complex subunit 3). Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: F32H2.4
    Corresponding_CDS_history: F32H2.4:wp60
      F32H2.4:wp192
    Corresponding_transcript: F32H2.4.1
    Other_sequence (12)
    Associated_feature: WBsf656673
      WBsf218236
      WBsf218237
  Experimental_info: RNAi_result: WBRNAi00116558 Inferred_automatically: RNAi_primary
      WBRNAi00046162 Inferred_automatically: RNAi_primary
      WBRNAi00003566 Inferred_automatically: RNAi_primary
      WBRNAi00002224 Inferred_automatically: RNAi_primary
      WBRNAi00076369 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr1025817
      Expr1034086
      Expr1150052
      Expr2017391
      Expr2035530
    Drives_construct: WBCnstr00032270
    Construct_product: WBCnstr00032270
    Microarray_results (20)
    Expression_cluster (93)
    SAGE_tag: SAGE:tagtgaaaag Strand: Sense
        Unambiguously_mapped
      SAGE:tagtgaaaagcagccaa Strand: Sense
        Unambiguously_mapped
      SAGE:tgctgcttccctattgt Strand: Antisense
      SAGE:tgctgcttcc Strand: Antisense
      SAGE:ttaaaacgtt Strand: Sense
        Unambiguously_mapped
      SAGE:ttaaaacgtttggacac Strand: Sense
        Unambiguously_mapped
      SAGE:ctacctgttc Strand: Antisense
    Interaction (23)
  Map_info: Map: I Position: 3.34186 Error: 0.002174
    Positive: Positive_clone: F32H2 Inferred_automatically: From sequence, transcript, pseudogene data
    Pseudo_map_position
  Reference: WBPaper00038491
    WBPaper00041879
    WBPaper00055090
    WBPaper00064339
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene