WormBase Tree Display for Gene: WBGene00009032
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| WBGene00009032 | SMap | S_parent | Sequence | CHROMOSOME_V | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | bgnt-1.3 | Person_evidence | WBPerson2136 | |||||
| WBPerson5364 | |||||||||
| Sequence_name | F21H7.10 | ||||||||
| Molecular_name | F21H7.10 | ||||||||
| F21H7.10.1 | |||||||||
| CE15879 | |||||||||
| Other_name | CELE_F21H7.10 | Accession_evidence | NDB | BX284605 | |||||
| Public_name | bgnt-1.3 | ||||||||
| DB_info | Database (11) | ||||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:49 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| 2 | 09 Oct 2015 09:56:12 | WBPerson2970 | Name_change | CGC_name | bgnt-1.3 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | bgnt | ||||||||
| Allele (118) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Ortholog (25) | |||||||||
| Paralog | WBGene00008290 | Caenorhabditis elegans | From_analysis | Inparanoid_8 | |||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| WBGene00008491 | Caenorhabditis elegans | From_analysis | Inparanoid_8 | ||||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| WBGene00015982 | Caenorhabditis elegans | From_analysis | Inparanoid_8 | ||||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| WBGene00010167 | Caenorhabditis elegans | From_analysis | Inparanoid_8 | ||||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| WBGene00010694 | Caenorhabditis elegans | From_analysis | Inparanoid_8 | ||||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| WBGene00011779 | Caenorhabditis elegans | From_analysis | Inparanoid_8 | ||||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| WBGene00017723 | Caenorhabditis elegans | From_analysis | Inparanoid_8 | ||||||
| Panther | |||||||||
| WormBase-Compara | |||||||||
| WBGene00010716 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| Structured_description | Automated_description | Enriched in germ line; hypodermis; and seam cell based on tiling array; RNA-seq; and single-cell RNA-seq studies. Is affected by several genes including daf-16; rrf-3; and eat-2 based on RNA-seq; microarray; and proteomic studies. Is affected by twelve chemicals including Ethanol; methylmercuric chloride; and multi-walled carbon nanotube based on RNA-seq and microarray studies. Human ortholog(s) of this gene implicated in congenital muscular dystrophy-dystroglycanopathy type A13. Human B4GAT1 enables glucuronosyltransferase activity. Is predicted to encode a protein with the following domain: Glycosyl-transferase for dystroglycan. Is an ortholog of human B4GAT1 (beta-1,4-glucuronyltransferase 1). | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Disease_info | Potential_model | DOID:0111238 | Homo sapiens | Inferred_automatically | Inferred by orthology to human genes with DO annotation (HGNC:15685) | ||||
| Molecular_info | Corresponding_CDS | F21H7.10 | |||||||
| Corresponding_transcript | F21H7.10.1 | ||||||||
| Associated_feature | WBsf653479 | ||||||||
| WBsf235128 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00013713 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00045253 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00031242 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1011325 | ||||||||
| Expr1033939 | |||||||||
| Expr1149182 | |||||||||
| Expr2009621 | |||||||||
| Expr2027859 | |||||||||
| Drives_construct | WBCnstr00032509 | ||||||||
| Construct_product | WBCnstr00032509 | ||||||||
| Microarray_results (18) | |||||||||
| Expression_cluster (77) | |||||||||
| Interaction | WBInteraction000247355 | ||||||||
| Map_info | Map | V | Position | 9.89072 | |||||
| Positive | Positive_clone | F21H7 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00038491 | ||||||||
| WBPaper00055090 | |||||||||
| WBPaper00065080 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
