WormBase Tree Display for Gene: WBGene00008871
expand all nodes | collapse all nodes | view schema
WBGene00008871 | SMap | S_parent | Sequence | CHROMOSOME_V | |||
---|---|---|---|---|---|---|---|
Identity | Version | 2 | |||||
Name | CGC_name | tag-314 | |||||
Sequence_name | F15H10.4 | ||||||
Molecular_name | F15H10.4 | ||||||
F15H10.4.1 | |||||||
CE41997 | |||||||
Other_name | CELE_F15H10.4 | Accession_evidence | NDB | BX284605 | |||
Public_name | tag-314 | ||||||
DB_info | Database | AceView | gene | 5K908 | |||
WormQTL | gene | WBGene00008871 | |||||
WormFlux | gene | WBGene00008871 | |||||
NDB | locus_tag | CELE_F15H10.4 | |||||
Panther | gene | CAEEL|WormBase=WBGene00008871|UniProtKB=G5EGI6 | |||||
family | PTHR11685 | ||||||
NCBI | gene | 179455 | |||||
RefSeq | protein | NM_182434.9 | |||||
TrEMBL | UniProtAcc | G5EGI6 | |||||
UniProt_GCRP | UniProtAcc | G5EGI6 | |||||
Species | Caenorhabditis elegans | ||||||
History | Version_change (2) | ||||||
Status | Live | ||||||
Gene_info | Biotype | SO:0001217 | |||||
Gene_class | tag | ||||||
Allele (32) | |||||||
Strain | WBStrain00035543 | ||||||
RNASeq_FPKM (74) | |||||||
GO_annotation (17) | |||||||
Ortholog (26) | |||||||
Paralog | WBGene00003967 | Caenorhabditis elegans | From_analysis | Panther | |||
WBGene00016156 | Caenorhabditis elegans | From_analysis | Panther | ||||
WBGene00016157 | Caenorhabditis elegans | From_analysis | Panther | ||||
WBGene00018964 | Caenorhabditis elegans | From_analysis | Panther | ||||
WBGene00018966 | Caenorhabditis elegans | From_analysis | Panther | ||||
WBGene00013538 | Caenorhabditis elegans | From_analysis | Panther | ||||
WBGene00016158 | Caenorhabditis elegans | From_analysis | Panther | ||||
WBGene00020462 | Caenorhabditis elegans | From_analysis | Panther | ||||
WBGene00015926 | Caenorhabditis elegans | From_analysis | Panther | ||||
WBGene00021721 | Caenorhabditis elegans | From_analysis | Panther | ||||
Structured_description | Automated_description | Predicted to enable ubiquitin conjugating enzyme binding activity and ubiquitin protein ligase activity. Predicted to be involved in several processes, including protein metabolic process; regulation of cellular response to oxidative stress; and regulation of protein metabolic process. Predicted to be located in Golgi apparatus; cytosol; and endoplasmic reticulum. Predicted to be part of ubiquitin ligase complex. | Paper_evidence | WBPaper00065943 | |||
Curator_confirmed | WBPerson324 | ||||||
WBPerson37462 | |||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||
Molecular_info | Corresponding_CDS | F15H10.4 | |||||
Corresponding_CDS_history | F15H10.4:wp87 | ||||||
F15H10.4:wp186 | |||||||
F15H10.4:wp194 | |||||||
F15H10.4:wp197 | |||||||
Corresponding_transcript | F15H10.4.1 | ||||||
Other_sequence | CRC11102_1 | ||||||
CR04316 | |||||||
Experimental_info | RNAi_result | WBRNAi00044762 | Inferred_automatically | RNAi_primary | |||
Expr_pattern | Expr1015586 | ||||||
Expr1148727 | |||||||
Expr2017270 | |||||||
Expr2035405 | |||||||
Microarray_results (11) | |||||||
Expression_cluster (101) | |||||||
Interaction (38) | |||||||
Map_info | Map | V | Position | 2.55191 | Error | 0.001574 | |
Positive | Positive_clone | F15H10 | Inferred_automatically | From sequence, transcript, pseudogene data | |||
Mapping_data | Multi_point | 5115 | |||||
4156 | |||||||
4678 | |||||||
Pseudo_map_position | |||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||
Method | Gene |