WormBase Tree Display for Gene: WBGene00008762
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WBGene00008762 | SMap | S_parent | Sequence | F13G3 | |||
---|---|---|---|---|---|---|---|
Identity (6) | |||||||
Gene_info | Biotype | SO:0001217 | |||||
Gene_class | ztf | ||||||
Allele (23) | |||||||
Strain | WBStrain00002071 | ||||||
RNASeq_FPKM (74) | |||||||
GO_annotation | 00064659 | ||||||
00064660 | |||||||
00064661 | |||||||
00064662 | |||||||
00064663 | |||||||
00064664 | |||||||
00064665 | |||||||
00064666 | |||||||
00064667 | |||||||
00064668 | |||||||
Ortholog (30) | |||||||
Paralog | WBGene00001824 | Caenorhabditis elegans | From_analysis | WormBase-Compara | |||
WBGene00003033 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||
WBGene00012385 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||
Structured_description | Automated_description | Enables DNA-binding transcription factor activity and RNA polymerase II cis-regulatory region sequence-specific DNA binding activity. Involved in negative regulation of transcription by RNA polymerase II and pharynx morphogenesis. Expressed in pharyngeal neurons; pharynx; rectum; and vulva. | Paper_evidence | WBPaper00065943 | |||
Curator_confirmed | WBPerson324 | ||||||
WBPerson37462 | |||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||
Molecular_info | Corresponding_CDS | F13G3.1 | |||||
Corresponding_transcript | F13G3.1.1 | ||||||
Other_sequence | MIC05495_1 | ||||||
JI170770.1 | |||||||
MI06075 | |||||||
Associated_feature (13) | |||||||
Transcription_factor | WBTranscriptionFactor000987 | ||||||
Experimental_info | RNAi_result | WBRNAi00030901 | Inferred_automatically | RNAi_primary | |||
WBRNAi00044533 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00003368 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00086262 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00086259 | Inferred_automatically | RNAi_primary | |||||
Expr_pattern | Expr3948 | ||||||
Expr5751 | |||||||
Expr1017265 | |||||||
Expr1033821 | |||||||
Expr1148486 | |||||||
Expr2036338 | |||||||
Drives_construct | WBCnstr00002854 | ||||||
WBCnstr00011772 | |||||||
WBCnstr00032709 | |||||||
Construct_product | WBCnstr00032709 | ||||||
Microarray_results (19) | |||||||
Expression_cluster (159) | |||||||
Interaction (274) | |||||||
Map_info | Map | I | Position | 1.87444 | Error | 0.000364 | |
Positive | Positive_clone | F13G3 | Inferred_automatically | From sequence, transcript, pseudogene data | |||
Mapping_data | Multi_point | 5331 | |||||
5087 | |||||||
Pseudo_map_position | |||||||
Reference | WBPaper00018703 | ||||||
WBPaper00027683 | |||||||
WBPaper00038491 | |||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||
Method | Gene |