WormBase Tree Display for Gene: WBGene00008696

WBGene00008696 SMap: S_parent: Sequence: F11D11
  Identity: Version: 3
    Name: CGC_name: clec-255 Person_evidence: WBPerson2531
      Sequence_name: F11D11.1
      Molecular_name: F11D11.1
        F11D11.1.1
        CE42391
      Other_name: CELE_F11D11.1 Accession_evidence: NDB BX284605
      Public_name: clec-255
    DB_info: Database: AceView gene 5T236
        WormQTL gene WBGene00008696
        WormFlux gene WBGene00008696
        NDB locus_tag CELE_F11D11.1
        Panther gene CAEEL|WormBase=WBGene00008696|UniProtKB=O62150
          family PTHR23124
        NCBI gene 184348
        RefSeq protein NM_075264.2
        TREEFAM TREEFAM_ID TF322199
        TrEMBL UniProtAcc O62150
        UniProt_GCRP UniProtAcc O62150
    Species: Caenorhabditis elegans
    History: Version_change: 1 26 May 2004 16:54:49 WBPerson1971 Event: Imported: Initial conversion from CDS class of WS125
        2 09 Oct 2007 15:40:27 WBPerson2970 Name_change: CGC_name: clec-255
        3 22 Feb 2008 08:59:03 WBPerson4025 Event: Split_into: WBGene00077659
      Split_into: WBGene00077659
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: clec
    Allele (108)
    RNASeq_FPKM (74)
    Ortholog: WBGene00140597 Caenorhabditis brenneri From_analysis: TreeFam
      WBGene00147200 Caenorhabditis brenneri From_analysis: TreeFam
      WBGene00151212 Caenorhabditis brenneri From_analysis: TreeFam
      WBGene00144833 Caenorhabditis brenneri From_analysis: TreeFam
      WBGene00132012 Caenorhabditis japonica From_analysis: Inparanoid_8
            WormBase-Compara
      CSP21.g6726 Caenorhabditis parvicauda From_analysis: WormBase-Compara
      CSP26.g17122 Caenorhabditis zanzibari From_analysis: WormBase-Compara
      CSP26.g17123 Caenorhabditis zanzibari From_analysis: WormBase-Compara
      CSP26.g17124 Caenorhabditis zanzibari From_analysis: WormBase-Compara
      chrV_pilon.g17764 Caenorhabditis elegans From_analysis: WormBase-Compara
    Paralog (120)
    Structured_description: Automated_description: Enriched in CEM; HOB; IL2 neuron; and ray neuron type B based on RNA-seq studies. Is affected by several genes including sir-2.1; clk-1; and pgl-1 based on tiling array; RNA-seq; and microarray studies. Is affected by Alovudine; dafa#1; and Sirolimus based on RNA-seq and microarray studies. Is predicted to encode a protein with the following domains: C-type lectin fold; PAN-3 domain; C-type lectin-like/link domain superfamily; PAN-like domain; and C-type lectin-like. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: F11D11.1
    Corresponding_CDS_history: F11D11.1:wp188
    Corresponding_transcript: F11D11.1.1
  Experimental_info: RNAi_result: WBRNAi00013123 Inferred_automatically: RNAi_primary
      WBRNAi00044376 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr1015443
      Expr1148319
    Microarray_results: SMD_F11D11.1
      SMD_F11D11.1:2
      180776_at
      Aff_F11D11.1
      GPL14144_F11D11.1_791-850_0.968_1_A
      GPL19516_CGZ0015575
      GPL21109_F11D11.1
      GPL3518_CE15792
      GPL8304_CE_WBGene00008696_A
      GPL8673_F11D11_1P00495
    Expression_cluster (32)
    Interaction: WBInteraction000297923
      WBInteraction000307973
      WBInteraction000381923
      WBInteraction000427564
      WBInteraction000455424
  Map_info: Map: V Position: 17.6905 Error: 0.011055
    Positive: Positive_clone: F11D11 Inferred_automatically: From sequence, transcript, pseudogene data
    Pseudo_map_position
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene