WormBase Tree Display for Gene: WBGene00008584
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WBGene00008584 | SMap | S_parent | Sequence | F08G5 | ||
---|---|---|---|---|---|---|
Identity (6) | ||||||
Gene_info | Biotype | SO:0001217 | ||||
Gene_class | irg | |||||
Allele (84) | ||||||
RNASeq_FPKM (74) | ||||||
GO_annotation | 00063974 | |||||
00063975 | ||||||
00063976 | ||||||
00063977 | ||||||
00063978 | ||||||
00063979 | ||||||
Ortholog (31) | ||||||
Paralog (17) | ||||||
Structured_description | Concise_description | F08G5.6 encodes a CUB-like domain-containing protein; F08G5.6 is involved in the transcriptional, innate immune response towards several different bacterial pathogens; an F08G5.6::gfp promoter fusion is expressed in the intestine and in head neurons; F08G5.6 expression is positively regulated in the intestine by the ELT-2 GATA transcription factor. | Paper_evidence | WBPaper00028482 | ||
WBPaper00029438 | ||||||
Curator_confirmed | WBPerson1843 | |||||
Date_last_updated | 19 Feb 2014 00:00:00 | |||||
Automated_description | Involved in defense response to Gram-negative bacterium and innate immune response. Expressed in head neurons and intestine. | Paper_evidence | WBPaper00065943 | |||
Curator_confirmed | WBPerson324 | |||||
WBPerson37462 | ||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | |||||
Date_last_updated | 29 Nov 2023 00:00:00 | |||||
Molecular_info (3) | ||||||
Experimental_info | RNAi_result | WBRNAi00012932 | Inferred_automatically | RNAi_primary | ||
WBRNAi00044057 | Inferred_automatically | RNAi_primary | ||||
WBRNAi00095405 | Inferred_automatically | RNAi_primary | ||||
WBRNAi00065094 | Inferred_automatically | RNAi_primary | ||||
WBRNAi00095422 | Inferred_automatically | RNAi_primary | ||||
WBRNAi00030673 | Inferred_automatically | RNAi_primary | ||||
WBRNAi00095216 | Inferred_automatically | RNAi_primary | ||||
Expr_pattern (5) | ||||||
Drives_construct | WBCnstr00012202 | |||||
WBCnstr00019358 | ||||||
WBCnstr00032855 | ||||||
Construct_product | WBCnstr00012202 | |||||
WBCnstr00015896 | ||||||
WBCnstr00032855 | ||||||
Microarray_results (17) | ||||||
Expression_cluster (397) | ||||||
Interaction (31) | ||||||
WBProcess | WBbiopr:00000039 | |||||
Map_info | Positive | Positive_clone | F08G5 | Inferred_automatically | From sequence, transcript, pseudogene data | |
Interpolated_map_position | IV | 5.92969 | ||||
Reference (16) | ||||||
Method | Gene |