WormBase Tree Display for Gene: WBGene00008538
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WBGene00008538 | SMap | S_parent | Sequence | F02H6 | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 3 | |||||||
Name (5) | |||||||||
DB_info | Database | AceView | gene | 4O987 | |||||
WormQTL | gene | WBGene00008538 | |||||||
WormFlux | gene | WBGene00008538 | |||||||
NDB | locus_tag | CELE_F02H6.5 | |||||||
Panther | gene | CAEEL|WormBase=WBGene00008538|UniProtKB=O62133 | |||||||
family | PTHR10632 | ||||||||
NCBI | gene | 178374 | |||||||
RefSeq | protein | NM_001307012.3 | |||||||
NM_001268870.4 | |||||||||
NM_001307302.3 | |||||||||
NM_001268869.4 | |||||||||
NM_001268871.3 | |||||||||
NM_001307303.3 | |||||||||
TREEFAM | TREEFAM_ID | TF314384 | |||||||
TrEMBL | UniProtAcc | A0A061ADY3 | |||||||
O62133 | |||||||||
C6KRP5 | |||||||||
M1ZJU1 | |||||||||
C6KRP6 | |||||||||
M1ZJZ0 | |||||||||
UniProt_GCRP | UniProtAcc | O62133 | |||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 26 May 2004 16:54:49 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
2 | 28 Apr 2008 17:14:20 | WBPerson2970 | Name_change | CGC_name | sqr-1 | ||||
3 | 18 Jul 2008 15:34:01 | WBPerson2970 | Name_change | CGC_name | sqr-1 -> sqrd-1 | ||||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Gene_class | sqrd | ||||||||
Allele (95) | |||||||||
Strain | WBStrain00003179 | ||||||||
WBStrain00000225 | |||||||||
WBStrain00000227 | |||||||||
WBStrain00000229 | |||||||||
WBStrain00000218 | |||||||||
WBStrain00000221 | |||||||||
WBStrain00052078 | |||||||||
RNASeq_FPKM (74) | |||||||||
GO_annotation | 00000274 | ||||||||
00000275 | |||||||||
00000276 | |||||||||
00000277 | |||||||||
00116428 | |||||||||
Contained_in_operon | CEOP4629 | ||||||||
Ortholog (31) | |||||||||
Paralog | WBGene00021183 | Caenorhabditis elegans | From_analysis | TreeFam | |||||
Inparanoid_8 | |||||||||
Panther | |||||||||
WormBase-Compara | |||||||||
WBGene00045102 | Caenorhabditis elegans | From_analysis | modENCODE_Pseudogenes | ||||||
Structured_description | Automated_description | Predicted to enable FAD binding activity and sulfide:quinone oxidoreductase activity. Predicted to be involved in sulfide oxidation, using sulfide:quinone oxidoreductase. Predicted to be located in mitochondrion. Is an ortholog of human SQOR (sulfide quinone oxidoreductase). | Paper_evidence | WBPaper00065943 | |||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
Molecular_info (4) | |||||||||
Experimental_info | RNAi_result | WBRNAi00043837 | Inferred_automatically | RNAi_primary | |||||
Expr_pattern | Chronogram2021 | ||||||||
Expr1023006 | |||||||||
Expr1033720 | |||||||||
Expr1147813 | |||||||||
Expr2016110 | |||||||||
Expr2034345 | |||||||||
Drives_construct | WBCnstr00003655 | ||||||||
WBCnstr00032888 | |||||||||
Construct_product | WBCnstr00032888 | ||||||||
Antibody | WBAntibody00002293 | ||||||||
Microarray_results (24) | |||||||||
Expression_cluster (218) | |||||||||
Interaction | WBInteraction000398121 | ||||||||
WBInteraction000400831 | |||||||||
WBInteraction000504997 | |||||||||
WBInteraction000519720 | |||||||||
WBInteraction000536841 | |||||||||
WBInteraction000536843 | |||||||||
WBInteraction000536844 | |||||||||
WBInteraction000539664 | |||||||||
WBInteraction000564292 | |||||||||
WBInteraction000568392 | |||||||||
Map_info (3) | |||||||||
Reference | WBPaper00038491 | ||||||||
WBPaper00039977 | |||||||||
WBPaper00042128 | |||||||||
WBPaper00048983 | |||||||||
WBPaper00055090 | |||||||||
WBPaper00059856 | |||||||||
WBPaper00066133 | |||||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
Method | Gene |