WormBase Tree Display for Gene: WBGene00008536
expand all nodes | collapse all nodes | view schema
| WBGene00008536 | SMap | S_parent | Sequence | F02H6 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | Sequence_name | F02H6.3 | |||||||
| Molecular_name | F02H6.3a | ||||||||
| F02H6.3a.1 | |||||||||
| CE43643 | |||||||||
| F02H6.3b | |||||||||
| CE27914 | |||||||||
| F02H6.3c | |||||||||
| F02H6.3b.1 | |||||||||
| F02H6.3c.1 | |||||||||
| Other_name | CELE_F02H6.3 | Accession_evidence | NDB | BX284604 | |||||
| Public_name | F02H6.3 | ||||||||
| DB_info | Database | AceView | gene | 4O969 | |||||
| WormQTL | gene | WBGene00008536 | |||||||
| WormFlux | gene | WBGene00008536 | |||||||
| NDB | locus_tag | CELE_F02H6.3 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00008536|UniProtKB=O62132 | |||||||
| family | PTHR37978 | ||||||||
| NCBI | gene | 178373 | |||||||
| RefSeq | protein | NM_001307011.3 | |||||||
| NM_070326.4 | |||||||||
| NM_070325.6 | |||||||||
| TrEMBL | UniProtAcc | O62132 | |||||||
| Q95ZW5 | |||||||||
| UniProt_GCRP | UniProtAcc | O62132 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:49 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele (34) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Ortholog | chrIV_pilon.g12442 | Caenorhabditis elegans | From_analysis | WormBase-Compara | |||||
| chrIV_pilon.g12443 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
| Paralog | WBGene00008535 | Caenorhabditis elegans | From_analysis | Panther | |||||
| WBGene00012303 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WormBase-Compara | |||||||||
| WBGene00010483 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WBGene00012886 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| WBGene00011018 | Caenorhabditis elegans | From_analysis | Panther | ||||||
| Structured_description | Automated_description | Enriched in NSM; cephalic sheath cell; germ line; hypodermis; and pharyngeal muscle cell based on tiling array and RNA-seq studies. Is affected by several genes including daf-2; skn-1; and glp-1 based on microarray; tiling array; and RNA-seq studies. Is affected by seventeen chemicals including hydrogen sulfide; rotenone; and mianserin based on microarray and RNA-seq studies. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | F02H6.3a | |||||||
| F02H6.3b | |||||||||
| F02H6.3c | |||||||||
| Corresponding_CDS_history | F02H6.3a:wp201 | ||||||||
| Corresponding_transcript | F02H6.3a.1 | ||||||||
| F02H6.3b.1 | |||||||||
| F02H6.3c.1 | |||||||||
| Associated_feature | WBsf646556 | ||||||||
| WBsf998522 | |||||||||
| WBsf998523 | |||||||||
| WBsf1018614 | |||||||||
| WBsf1018615 | |||||||||
| WBsf229492 | |||||||||
| WBsf229493 | |||||||||
| WBsf229494 | |||||||||
| WBsf229495 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00043835 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00062191 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00000888 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00012792 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00033463 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1021865 | ||||||||
| Expr1033718 | |||||||||
| Expr1147811 | |||||||||
| Expr2002230 | |||||||||
| Expr2020451 | |||||||||
| Microarray_results (23) | |||||||||
| Expression_cluster (182) | |||||||||
| Interaction (109) | |||||||||
| Map_info | Positive | Positive_clone | F02H6 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | IV | 11.5229 | |||||||
| Method | Gene |
