WormBase Tree Display for Gene: WBGene00008487
expand all nodes | collapse all nodes | view schema
| WBGene00008487 | SMap | S_parent | Sequence | F01D4 | ||||||
|---|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | ||||||||
| Name | Sequence_name | F01D4.3 | ||||||||
| Molecular_name | F01D4.3 | |||||||||
| Other_name | CELE_F01D4.3 | Accession_evidence | NDB | BX284604 | ||||||
| Public_name | F01D4.3 | |||||||||
| DB_info | Database | AceView | gene | 4L236 | ||||||
| WormQTL | gene | WBGene00008487 | ||||||||
| NDB | locus_tag | CELE_F01D4.3 | ||||||||
| NCBI | gene | 184053 | ||||||||
| Species | Caenorhabditis elegans | |||||||||
| History | Version_change | 1 | 26 May 2004 16:54:49 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | |||
| 2 | 22 Feb 2012 10:36:54 | WBPerson4025 | Event | Changed_class | CDS | Pseudogene | ||||
| Status | Live | |||||||||
| Gene_info | Biotype | SO:0000336 | ||||||||
| Allele (32) | ||||||||||
| Strain | WBStrain00037527 | |||||||||
| RNASeq_FPKM (74) | ||||||||||
| Ortholog | WBGene00056266 | Caenorhabditis remanei | From_analysis | OMA | ||||||
| WBGene00039418 | Caenorhabditis briggsae | From_analysis | OrthoMCL | |||||||
| Structured_description | Automated_description | Enriched in AVK; FLP; germ line; and in male based on microarray and RNA-seq studies. Is affected by several genes including eat-2; clk-1; and npr-1 based on microarray and RNA-seq studies. Is affected by six chemicals including hydrogen sulfide; methylmercuric chloride; and cholesterol based on microarray and RNA-seq studies. | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | |||||||||
| WBPerson37462 | ||||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | |||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | |||||||||
| Molecular_info | Corresponding_CDS_history | F01D4.3:wp99 | ||||||||
| F01D4.3:wp161 | ||||||||||
| F01D4.3:wp230 | ||||||||||
| Corresponding_pseudogene | F01D4.3 | |||||||||
| Corresponding_pseudogene_history | F01D4.3:wp243 | |||||||||
| Other_sequence | ACC19274_1 | |||||||||
| ACC12826_1 | ||||||||||
| Acan_isotig05532 | ||||||||||
| EX546995.1 | ||||||||||
| Oden_isotig19116 | ||||||||||
| Oden_isotig27013 | ||||||||||
| EX549700.1 | ||||||||||
| Experimental_info | Expr_pattern | Expr1018761 | ||||||||
| Expr1147705 | ||||||||||
| Microarray_results (16) | ||||||||||
| Expression_cluster (76) | ||||||||||
| Interaction (35) | ||||||||||
| Map_info | Positive | Positive_clone | F01D4 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Interpolated_map_position | IV | 4.60068 | ||||||||
| Reference | WBPaper00027258 | |||||||||
| WBPaper00038491 | ||||||||||
| Method | Gene |
