WormBase Tree Display for Gene: WBGene00008407
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| WBGene00008407 | SMap | S_parent | Sequence | D2023 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | Sequence_name | D2023.3 | |||||||
| Molecular_name | D2023.3a | ||||||||
| D2023.3a.1 | |||||||||
| CE45859 | |||||||||
| D2023.3b | |||||||||
| CE45232 | |||||||||
| D2023.3b.1 | |||||||||
| Other_name | CELE_D2023.3 | Accession_evidence | NDB | BX284605 | |||||
| Public_name | D2023.3 | ||||||||
| DB_info | Database | AceView | gene | 5M282 | |||||
| WormQTL | gene | WBGene00008407 | |||||||
| WormFlux | gene | WBGene00008407 | |||||||
| NDB | locus_tag | CELE_D2023.3 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00008407|UniProtKB=P90785 | |||||||
| family | PTHR46129 | ||||||||
| NCBI | gene | 183945 | |||||||
| RefSeq | protein | NM_001269445.4 | |||||||
| NM_001269446.3 | |||||||||
| TREEFAM | TREEFAM_ID | TF317007 | |||||||
| TrEMBL | UniProtAcc | P90785 | |||||||
| E0AHC8 | |||||||||
| UniProt_GCRP | UniProtAcc | P90785 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:49 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| 2 | 28 Feb 2011 11:09:22 | WBPerson4025 | Event | Acquires_merge | WBGene00195062 | ||||
| Acquires_merge | WBGene00195062 | ||||||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele (144) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Ortholog (25) | |||||||||
| Structured_description | Automated_description | Enriched in excretory system; intestine; neurons; somatic gonad precursor; and ventral nerve cord based on tiling array; RNA-seq; single-cell RNA-seq; and microarray studies. Is affected by several genes including daf-2; skn-1; and eat-2 based on microarray and RNA-seq studies. Is affected by eight chemicals including Sodium Chloride; Rifampin; and Sirolimus based on RNA-seq and microarray studies. Is predicted to encode a protein with the following domains: C2 domain superfamily; C2 domain; Phosphorylation site; and Synaptotagmin-14/14L/16. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | D2023.3a | |||||||
| D2023.3b | |||||||||
| Corresponding_CDS_history | D2023.3:wp187 | ||||||||
| D2023.3a:wp224 | |||||||||
| Corresponding_transcript | D2023.3a.1 | ||||||||
| D2023.3b.1 | |||||||||
| Other_sequence (13) | |||||||||
| Associated_feature | WBsf669414 | ||||||||
| WBsf669415 | |||||||||
| WBsf669416 | |||||||||
| WBsf1001446 | |||||||||
| WBsf1001447 | |||||||||
| WBsf1001448 | |||||||||
| WBsf1020501 | |||||||||
| WBsf1020502 | |||||||||
| WBsf234580 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00012572 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00043453 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1022807 | ||||||||
| Expr1147447 | |||||||||
| Expr2002070 | |||||||||
| Expr2020295 | |||||||||
| Microarray_results (19) | |||||||||
| Expression_cluster (119) | |||||||||
| Interaction | WBInteraction000349841 | ||||||||
| WBInteraction000380850 | |||||||||
| WBInteraction000394014 | |||||||||
| Map_info | Positive | Positive_clone | D2023 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | V | 3.38349 | |||||||
| Reference | WBPaper00038491 | ||||||||
| WBPaper00055090 | |||||||||
| Method | Gene |
