WormBase Tree Display for Gene: WBGene00008324
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| WBGene00008324 | SMap | S_parent | Sequence | C55A1 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | Sequence_name | C55A1.7 | |||||||
| Molecular_name | C55A1.7 | ||||||||
| C55A1.7.1 | |||||||||
| CE08990 | |||||||||
| Other_name | CELE_C55A1.7 | Accession_evidence | NDB | BX284605 | |||||
| Public_name | C55A1.7 | ||||||||
| DB_info | Database | AceView | gene | 5Q120 | |||||
| WormQTL | gene | WBGene00008324 | |||||||
| WormFlux | gene | WBGene00008324 | |||||||
| NDB | locus_tag | CELE_C55A1.7 | |||||||
| NCBI | gene | 183828 | |||||||
| RefSeq | protein | NM_074491.3 | |||||||
| TREEFAM | TREEFAM_ID | TF322318 | |||||||
| TrEMBL | UniProtAcc | G5EG82 | |||||||
| UniProt_GCRP | UniProtAcc | G5EG82 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:49 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele (13) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Ortholog (21) | |||||||||
| Paralog | WBGene00008322 | Caenorhabditis elegans | From_analysis | TreeFam | |||||
| WormBase-Compara | |||||||||
| WBGene00008323 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| WBGene00008794 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| WBGene00008797 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| WBGene00045490 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| WBGene00008792 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| WormBase-Compara | |||||||||
| WBGene00045331 | Caenorhabditis elegans | From_analysis | TreeFam | ||||||
| Structured_description | Automated_description | Enriched in coelomocyte and head mesodermal cell based on single-cell RNA-seq studies. Is affected by several genes including daf-16; eat-2; and sir-2.1 based on RNA-seq and microarray studies. Is affected by Rifampin; allantoin; and nitroguanidine based on RNA-seq and microarray studies. Is predicted to encode a protein with the following domains: Domain of unknown function (DUF4473) and Protein of unknown function DUF4473. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | C55A1.7 | |||||||
| Corresponding_transcript | C55A1.7.1 | ||||||||
| Associated_feature | WBsf653460 | ||||||||
| WBsf235076 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00043201 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00012423 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00012425 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00043204 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00103231 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1147184 | ||||||||
| Expr2001945 | |||||||||
| Expr2020168 | |||||||||
| Drives_construct | WBCnstr00033054 | ||||||||
| Construct_product | WBCnstr00033054 | ||||||||
| Microarray_results | SMD_C55A1.7 | ||||||||
| 178914_s_at | |||||||||
| A_12_P102847 | |||||||||
| A_12_P138535 | |||||||||
| Expression_cluster (32) | |||||||||
| Interaction (25) | |||||||||
| Map_info | Positive | Positive_clone | C55A1 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | V | 8.53811 | |||||||
| Method | Gene |
