WormBase Tree Display for Gene: WBGene00008794
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| WBGene00008794 | SMap | S_parent | Sequence | F14D7 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | spig-4 | Person_evidence | WBPerson260 | |||||
| Sequence_name | F14D7.7 | ||||||||
| Molecular_name | F14D7.7 | ||||||||
| F14D7.7.1 | |||||||||
| CE09385 | |||||||||
| Other_name | CELE_F14D7.7 | Accession_evidence | NDB | BX284605 | |||||
| Public_name | spig-4 | ||||||||
| DB_info | Database | AceView | gene | 5O788 | |||||
| WormQTL | gene | WBGene00008794 | |||||||
| WormFlux | gene | WBGene00008794 | |||||||
| NDB | locus_tag | CELE_F14D7.7 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00008794|UniProtKB=Q19451 | |||||||
| family | PTHR33272 | ||||||||
| NCBI | gene | 184467 | |||||||
| RefSeq | protein | NM_074144.2 | |||||||
| TREEFAM | TREEFAM_ID | TF322318 | |||||||
| TrEMBL | UniProtAcc | Q19451 | |||||||
| UniProt_GCRP | UniProtAcc | Q19451 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:49 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| 2 | 12 Jan 2023 20:48:33 | WBPerson51134 | Name_change | CGC_name | spig-4 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | spig | ||||||||
| Allele | WBVar02123600 | ||||||||
| WBVar01499621 | |||||||||
| WBVar01500212 | |||||||||
| WBVar01500213 | |||||||||
| WBVar01499299 | |||||||||
| WBVar01066633 | |||||||||
| WBVar01499316 | |||||||||
| WBVar01499698 | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Ortholog (14) | |||||||||
| Paralog (19) | |||||||||
| Structured_description | Automated_description | Enriched in AMshL; AMshR; amphid sheath cell; and hypodermis based on RNA-seq and single-cell RNA-seq studies. Is affected by several genes including daf-16; daf-2; and age-1 based on microarray and RNA-seq studies. Is affected by nineteen chemicals including methylmercuric chloride; Tunicamycin; and manganese chloride based on microarray and RNA-seq studies. Is predicted to encode a protein with the following domains: Domain of unknown function (DUF4473) and Protein of unknown function DUF4473. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | F14D7.7 | |||||||
| Corresponding_transcript | F14D7.7.1 | ||||||||
| Other_sequence | Tcir_isotig14724 | ||||||||
| Associated_feature | WBsf234930 | ||||||||
| Experimental_info | RNAi_result | WBRNAi00044605 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00030943 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00013282 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1148569 | ||||||||
| Expr2002574 | |||||||||
| Expr2020791 | |||||||||
| Drives_construct | WBCnstr00032681 | ||||||||
| Construct_product | WBCnstr00032681 | ||||||||
| Microarray_results (18) | |||||||||
| Expression_cluster (174) | |||||||||
| Interaction | WBInteraction000172775 | ||||||||
| WBInteraction000207202 | |||||||||
| WBInteraction000237781 | |||||||||
| WBInteraction000278728 | |||||||||
| WBInteraction000296085 | |||||||||
| WBInteraction000304944 | |||||||||
| WBInteraction000317149 | |||||||||
| WBInteraction000399473 | |||||||||
| WBInteraction000413489 | |||||||||
| Map_info | Positive | Positive_clone | F14D7 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | V | 6.2274 | |||||||
| Method | Gene |
