WormBase Tree Display for Gene: WBGene00008263
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| WBGene00008263 | SMap | S_parent | Sequence | C53A5 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 3 | |||||||
| Name | Sequence_name | C53A5.2 | |||||||
| Molecular_name | C53A5.2 | ||||||||
| C53A5.2.1 | |||||||||
| CE44108 | |||||||||
| Other_name | CELE_C53A5.2 | Accession_evidence | NDB | BX284605 | |||||
| Public_name | C53A5.2 | ||||||||
| DB_info | Database | AceView | gene | 5P0 | |||||
| WormQTL | gene | WBGene00008263 | |||||||
| WormFlux | gene | WBGene00008263 | |||||||
| NDB | locus_tag | CELE_C53A5.2 | |||||||
| NCBI | gene | 179957 | |||||||
| RefSeq | protein | NM_074196.4 | |||||||
| TrEMBL | UniProtAcc | C8JQS4 | |||||||
| UniProt_GCRP | UniProtAcc | C8JQS4 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:48 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| 2 | 04 Aug 2009 16:59:32 | WBPerson4025 | Event | Split_into | WBGene00194706 | ||||
| 3 | 04 Aug 2009 16:59:49 | WBPerson4025 | Event | Split_into | WBGene00194707 | ||||
| Split_into | WBGene00194706 | ||||||||
| WBGene00194707 | |||||||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele | WBVar01068129 | ||||||||
| WBVar01499621 | |||||||||
| WBVar01498921 | |||||||||
| WBVar01498922 | |||||||||
| WBVar01500212 | |||||||||
| WBVar01500213 | |||||||||
| WBVar01499299 | |||||||||
| WBVar01499316 | |||||||||
| WBVar01499698 | |||||||||
| RNASeq_FPKM (74) | |||||||||
| Contained_in_operon | CEOP5424 | ||||||||
| Ortholog (23) | |||||||||
| Structured_description | Automated_description | Enriched in several structures, including ABarpaapap; ABarpaappa; ABarpaappp; germ line; and sensory neurons based on tiling array; RNA-seq; and single-cell RNA-seq studies. Is affected by several genes including daf-12; rrf-3; and eat-2 based on microarray and RNA-seq studies. Is affected by thirteen chemicals including 1-methylnicotinamide; Alovudine; and stavudine based on RNA-seq and microarray studies. | Paper_evidence | WBPaper00065943 | |||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | C53A5.2 | |||||||
| Corresponding_CDS_history | C53A5.2:wp183 | ||||||||
| C53A5.2a:wp206 | |||||||||
| C53A5.2b:wp206 | |||||||||
| C53A5.2c:wp206 | |||||||||
| Corresponding_transcript | C53A5.2.1 | ||||||||
| Other_sequence | HC07733 | ||||||||
| HCC05609_1 | |||||||||
| Dviv_isotig13050 | |||||||||
| Dviv_isotig13051 | |||||||||
| Associated_feature | WBsf653394 | ||||||||
| WBsf004163 | |||||||||
| WBsf234958 | |||||||||
| WBsf234959 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00087791 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00076238 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00012334 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1022528 | ||||||||
| Expr1033589 | |||||||||
| Expr1147025 | |||||||||
| Expr2001878 | |||||||||
| Expr2020104 | |||||||||
| Drives_construct | WBCnstr00033103 | ||||||||
| Construct_product | WBCnstr00033103 | ||||||||
| Microarray_results | SMD_C53A5.2 | ||||||||
| GPL19516_CGZ0010335 | |||||||||
| GPL21109_C53A5.2 | |||||||||
| Expression_cluster (102) | |||||||||
| Interaction (36) | |||||||||
| Map_info | Positive | Positive_clone | C53A5 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | V | 6.43305 | |||||||
| Reference | WBPaper00035157 | ||||||||
| WBPaper00038491 | |||||||||
| WBPaper00055090 | |||||||||
| Method | Gene |
