WormBase Tree Display for Gene: WBGene00008257
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WBGene00008257 | SMap | S_parent | Sequence | C52A11 | |||||
---|---|---|---|---|---|---|---|---|---|
Identity | Version | 1 | |||||||
Name | Sequence_name | C52A11.3 | |||||||
Molecular_name | C52A11.3 | ||||||||
C52A11.3.1 | |||||||||
CE40833 | |||||||||
Other_name | CELE_C52A11.3 | Accession_evidence | NDB | BX284602 | |||||
Public_name | C52A11.3 | ||||||||
DB_info | Database | AceView | gene | 2L27 | |||||
WormQTL | gene | WBGene00008257 | |||||||
WormFlux | gene | WBGene00008257 | |||||||
NDB | locus_tag | CELE_C52A11.3 | |||||||
NCBI | gene | 183712 | |||||||
RefSeq | protein | NM_063914.4 | |||||||
SwissProt | UniProtAcc | Q09284 | |||||||
UniProt_GCRP | UniProtAcc | Q09284 | |||||||
Species | Caenorhabditis elegans | ||||||||
History | Version_change | 1 | 26 May 2004 16:54:48 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
Status | Live | ||||||||
Gene_info | Biotype | SO:0001217 | |||||||
Allele (22) | |||||||||
RNASeq_FPKM (74) | |||||||||
Ortholog | CSP21.g14933 | Caenorhabditis parvicauda | From_analysis | WormBase-Compara | |||||
chrII_pilon.g5803 | Caenorhabditis elegans | From_analysis | WormBase-Compara | ||||||
Structured_description | Concise_description | C52A11.3 encodes a PDZ domain-containing protein. | Paper_evidence | WBPaper00032233 | |||||
Curator_confirmed | WBPerson1843 | ||||||||
Date_last_updated | 12 Nov 2013 00:00:00 | ||||||||
Automated_description | Enriched in ASI; AVE; RID; neurons; and sensory neurons based on tiling array; RNA-seq; and single-cell RNA-seq studies. Is affected by several genes including daf-16; cyc-1; and mir-34 based on microarray; tiling array; and RNA-seq studies. Is affected by Ag nanoparticles based on RNA-seq studies. Is predicted to encode a protein with the following domains: PDZ superfamily and PDZ domain. | Paper_evidence | WBPaper00065943 | ||||||
Curator_confirmed | WBPerson324 | ||||||||
WBPerson37462 | |||||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
Molecular_info | Corresponding_CDS | C52A11.3 | |||||||
Corresponding_CDS_history | C52A11.3:wp174 | ||||||||
Corresponding_transcript | C52A11.3.1 | ||||||||
Associated_feature | WBsf989459 | ||||||||
WBsf989460 | |||||||||
WBsf1013080 | |||||||||
WBsf1013081 | |||||||||
Experimental_info | RNAi_result | WBRNAi00043003 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00012287 | Inferred_automatically | RNAi_primary | |||||||
Expr_pattern | Expr1026437 | ||||||||
Expr1146967 | |||||||||
Expr2001856 | |||||||||
Expr2020082 | |||||||||
Drives_construct | WBCnstr00033109 | ||||||||
Construct_product | WBCnstr00033109 | ||||||||
Microarray_results (17) | |||||||||
Expression_cluster (34) | |||||||||
Interaction (71) | |||||||||
Map_info | Positive | Positive_clone | C52A11 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
Interpolated_map_position | II | 3.12488 | |||||||
Method | Gene |