WormBase Tree Display for Gene: WBGene00008214
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WBGene00008214 | SMap | S_parent | Sequence | C49F8 | |||
---|---|---|---|---|---|---|---|
Identity | Version | 3 | |||||
Name | CGC_name | gem-1 | Paper_evidence | WBPaper00032439 | |||
Person_evidence | WBPerson352 | ||||||
Sequence_name | C49F8.2 | ||||||
Molecular_name | C49F8.2 | ||||||
C49F8.2.1 | |||||||
CE31456 | |||||||
Other_name | CELE_C49F8.2 | Accession_evidence | NDB | BX284606 | |||
Public_name | gem-1 | ||||||
DB_info | Database | AceView | gene | XN990 | |||
WormQTL | gene | WBGene00008214 | |||||
WormFlux | gene | WBGene00008214 | |||||
NDB | locus_tag | CELE_C49F8.2 | |||||
Panther | gene | CAEEL|WormBase=WBGene00008214|UniProtKB=Q18712 | |||||
family | PTHR11360 | ||||||
NCBI | gene | 181458 | |||||
RefSeq | protein | NM_001392871.1 | |||||
TrEMBL | UniProtAcc | Q18712 | |||||
UniProt_GCRP | UniProtAcc | Q18712 | |||||
Species | Caenorhabditis elegans | ||||||
History | Version_change (3) | ||||||
Split_into | WBGene00303047 | ||||||
Status | Live | ||||||
Gene_info | Biotype | SO:0001217 | |||||
Gene_class | gem | ||||||
Allele (132) | |||||||
Strain | WBStrain00007129 | ||||||
WBStrain00007130 | |||||||
RNASeq_FPKM (74) | |||||||
GO_annotation | 00062141 | ||||||
00062142 | |||||||
00062143 | |||||||
00062144 | |||||||
00062145 | |||||||
00116149 | |||||||
00116150 | |||||||
Ortholog (34) | |||||||
Paralog | WBGene00003986 | Caenorhabditis elegans | From_analysis | TreeFam | |||
Panther | |||||||
WormBase-Compara | |||||||
WBGene00020168 | Caenorhabditis elegans | From_analysis | TreeFam | ||||
Panther | |||||||
WormBase-Compara | |||||||
WBGene00015676 | Caenorhabditis elegans | From_analysis | Panther | ||||
WormBase-Compara | |||||||
WBGene00010340 | Caenorhabditis elegans | From_analysis | TreeFam | ||||
Panther | |||||||
WormBase-Compara | |||||||
WBGene00015273 | Caenorhabditis elegans | From_analysis | TreeFam | ||||
Panther | |||||||
WormBase-Compara | |||||||
WBGene00021227 | Caenorhabditis elegans | From_analysis | TreeFam | ||||
WormBase-Compara | |||||||
WBGene00010834 | Caenorhabditis elegans | From_analysis | Panther | ||||
WormBase-Compara | |||||||
WBGene00013353 | Caenorhabditis elegans | From_analysis | Panther | ||||
WormBase-Compara | |||||||
WBGene00017369 | Caenorhabditis elegans | From_analysis | Panther | ||||
WormBase-Compara | |||||||
Structured_description | Automated_description | Predicted to enable monocarboxylic acid transmembrane transporter activity. Predicted to be involved in monocarboxylic acid transport. Located in plasma membrane. Expressed in several structures, including hermaphrodite distal tip cell; neurons; pharynx; somatic gonad precursor; and vulval muscle. | Paper_evidence | WBPaper00065943 | |||
Curator_confirmed | WBPerson324 | ||||||
WBPerson37462 | |||||||
Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||
Date_last_updated | 29 Nov 2023 00:00:00 | ||||||
Molecular_info | Corresponding_CDS | C49F8.2 | |||||
Corresponding_CDS_history | C49F8.2:wp83 | ||||||
C49F8.2a:wp264 | |||||||
C49F8.2b:wp264 | |||||||
Corresponding_transcript | C49F8.2.1 | ||||||
Other_sequence | Tcol_isotig23290 | ||||||
Dviv_isotig30313 | |||||||
DVC02653_1 | |||||||
EV850113.1 | |||||||
EV853232.1 | |||||||
Associated_feature (11) | |||||||
Experimental_info | RNAi_result | WBRNAi00042816 | Inferred_automatically | RNAi_primary | |||
WBRNAi00001231 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00012150 | Inferred_automatically | RNAi_primary | |||||
WBRNAi00084914 | Inferred_automatically | RNAi_primary | |||||
Expr_pattern | Expr2055 | ||||||
Expr8971 | |||||||
Expr1012835 | |||||||
Expr1033568 | |||||||
Expr1146796 | |||||||
Expr2012018 | |||||||
Expr2030254 | |||||||
Drives_construct | WBCnstr00013645 | ||||||
WBCnstr00033148 | |||||||
Construct_product | WBCnstr00013645 | ||||||
WBCnstr00033148 | |||||||
Microarray_results (22) | |||||||
Expression_cluster (100) | |||||||
Map_info | Map | X | Position | 11.7798 | |||
Positive | Positive_clone | C49F8 | Inferred_automatically | From sequence, transcript, pseudogene data | |||
Pseudo_map_position | |||||||
Reference | WBPaper00032439 | ||||||
WBPaper00038491 | |||||||
WBPaper00044313 | |||||||
WBPaper00055090 | |||||||
WBPaper00065331 | |||||||
Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||
Method | Gene |