WormBase Tree Display for Gene: WBGene00008029
expand all nodes | collapse all nodes | view schema
| WBGene00008029 | SMap | S_parent | Sequence | C39E9 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 2 | |||||||
| Name | CGC_name | scl-7 | Person_evidence | WBPerson261 | |||||
| Sequence_name | C39E9.5 | ||||||||
| Molecular_name | C39E9.5 | ||||||||
| C39E9.5.1 | |||||||||
| CE05388 | |||||||||
| Other_name | CELE_C39E9.5 | Accession_evidence | NDB | BX284604 | |||||
| Public_name | scl-7 | ||||||||
| DB_info | Database | AceView | gene | 4N835 | |||||
| WormQTL | gene | WBGene00008029 | |||||||
| WormFlux | gene | WBGene00008029 | |||||||
| NDB | locus_tag | CELE_C39E9.5 | |||||||
| Panther | gene | CAEEL|WormBase=WBGene00008029|UniProtKB=Q18539 | |||||||
| family | PTHR10334 | ||||||||
| NCBI | gene | 183344 | |||||||
| RefSeq | protein | NM_070108.3 | |||||||
| TREEFAM | TREEFAM_ID | TF352352 | |||||||
| TrEMBL | UniProtAcc | Q18539 | |||||||
| UniProt_GCRP | UniProtAcc | Q18539 | |||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:48 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| 2 | 07 Nov 2007 11:51:23 | WBPerson2970 | Name_change | CGC_name | scl-7 | ||||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Gene_class | scl | ||||||||
| Allele (21) | |||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation | 00061605 | ||||||||
| Ortholog (54) | |||||||||
| Paralog (32) | |||||||||
| Structured_description | Concise_description | scl-7 encodes a predicted extracellular protein that is a member of the C. elegans family of SCP/TAPS domain-containing proteins. | Curator_confirmed | WBPerson1843 | |||||
| Date_last_updated | 26 Mar 2008 00:00:00 | ||||||||
| Automated_description | Predicted to be located in extracellular space. Is an ortholog of human PI15 (peptidase inhibitor 15). | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | C39E9.5 | |||||||
| Corresponding_transcript | C39E9.5.1 | ||||||||
| Associated_feature | WBsf229378 | ||||||||
| Experimental_info | RNAi_result | WBRNAi00011790 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00029691 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00042223 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Expr1013747 | ||||||||
| Expr1146214 | |||||||||
| Expr2015642 | |||||||||
| Drives_construct | WBCnstr00033294 | ||||||||
| Construct_product | WBCnstr00033294 | ||||||||
| Microarray_results (18) | |||||||||
| Expression_cluster (60) | |||||||||
| Interaction (19) | |||||||||
| Map_info | Map | IV | Position | 7.77931 | Error | 0.01053 | |||
| Positive | Positive_clone | C39E9 | Inferred_automatically | From sequence, transcript, pseudogene data | |||||
| Pseudo_map_position | |||||||||
| Reference | WBPaper00038491 | ||||||||
| WBPaper00055090 | |||||||||
| Remark | Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. | CGC_data_submission | |||||||
| Method | Gene |
