WormBase Tree Display for Gene: WBGene00008019
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| WBGene00008019 | SMap | S_parent | Sequence | C38H2 | |||||
|---|---|---|---|---|---|---|---|---|---|
| Identity | Version | 1 | |||||||
| Name | Sequence_name | C38H2.2 | |||||||
| Molecular_name | C38H2.2 | ||||||||
| C38H2.2.1 | |||||||||
| CE32602 | |||||||||
| Other_name | CELE_C38H2.2 | Accession_evidence | NDB | BX284603 | |||||
| Public_name | C38H2.2 | ||||||||
| DB_info | Database (12) | ||||||||
| Species | Caenorhabditis elegans | ||||||||
| History | Version_change | 1 | 26 May 2004 16:54:48 | WBPerson1971 | Event | Imported | Initial conversion from CDS class of WS125 | ||
| Status | Live | ||||||||
| Gene_info | Biotype | SO:0001217 | |||||||
| Allele (68) | |||||||||
| Strain | WBStrain00036809 | ||||||||
| RNASeq_FPKM (74) | |||||||||
| GO_annotation (11) | |||||||||
| Ortholog (51) | |||||||||
| Paralog (11) | |||||||||
| Structured_description | Concise_description | C38H2.2 encodes a core 1 UDP-Gal:GalNAcalpha1-Ser/Thrbeta1,3-galactosyltransferase (core 1 beta3-Gal-T or T-synthase,EC2.4.1.122); C38H2.2 protein is predicted to be primarilyextracellular, with an N-terminal transmembrane domain; C38H2.2 shares 6conserved cysteine residues with all known T-synthases, and isubiquitously expressed; enzymatically active C38H2.2 can be generatedfrom insect but not mammalian cells, suggesting thatinvertebrate-specific chaperones are required for its activity. | Paper_evidence | WBPaper00027670 | |||||
| Curator_confirmed | WBPerson567 | ||||||||
| Date_last_updated | 25 Oct 2006 00:00:00 | ||||||||
| Automated_description | Predicted to enable glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase activity. Predicted to be involved in protein glycosylation. Predicted to be located in membrane. Expressed in several structures, including tail. Is an ortholog of human C1GALT1 (core 1 synthase, glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1). | Paper_evidence | WBPaper00065943 | ||||||
| Curator_confirmed | WBPerson324 | ||||||||
| WBPerson37462 | |||||||||
| Inferred_automatically | This description was generated automatically by a script based on data from the WS291 version of WormBase | ||||||||
| Date_last_updated | 29 Nov 2023 00:00:00 | ||||||||
| Molecular_info | Corresponding_CDS | C38H2.2 | |||||||
| Corresponding_CDS_history | C38H2.2:wp91 | ||||||||
| Corresponding_transcript | C38H2.2.1 | ||||||||
| Other_sequence (62) | |||||||||
| Associated_feature | WBsf717102 | ||||||||
| WBsf717103 | |||||||||
| WBsf717980 | |||||||||
| WBsf993999 | |||||||||
| WBsf994000 | |||||||||
| WBsf994001 | |||||||||
| WBsf994002 | |||||||||
| WBsf1015781 | |||||||||
| WBsf225717 | |||||||||
| Experimental_info | RNAi_result | WBRNAi00065874 | Inferred_automatically | RNAi_primary | |||||
| WBRNAi00005987 | Inferred_automatically | RNAi_primary | |||||||
| WBRNAi00042176 | Inferred_automatically | RNAi_primary | |||||||
| Expr_pattern | Chronogram541 | ||||||||
| Expr4234 | |||||||||
| Expr5473 | |||||||||
| Expr1013767 | |||||||||
| Expr1033488 | |||||||||
| Expr1146171 | |||||||||
| Expr2001519 | |||||||||
| Expr2019741 | |||||||||
| Drives_construct | WBCnstr00004022 | ||||||||
| WBCnstr00011845 | |||||||||
| WBCnstr00033302 | |||||||||
| Construct_product | WBCnstr00033302 | ||||||||
| Microarray_results (25) | |||||||||
| Expression_cluster (174) | |||||||||
| Interaction (21) | |||||||||
| Map_info | Positive | Positive_clone | C38H2 | Inferred_automatically | From sequence, transcript, pseudogene data | ||||
| Interpolated_map_position | III | 2.47991 | |||||||
| Reference | WBPaper00027670 | ||||||||
| WBPaper00029024 | |||||||||
| WBPaper00038491 | |||||||||
| WBPaper00055090 | |||||||||
| Method | Gene |
