WormBase Tree Display for Gene: WBGene00008017

WBGene00008017 SMap: S_parent: Sequence: C38D9
  Identity: Version: 3
    Name: CGC_name: fbxa-176 Person_evidence: WBPerson655
      Sequence_name: C38D9.9
      Molecular_name: C38D9.9
        C38D9.9.1
        CE40751
      Other_name: CELE_C38D9.9 Accession_evidence: NDB BX284605
      Public_name: fbxa-176
    DB_info: Database: AceView gene 5S33
        WormQTL gene WBGene00008017
        WormFlux gene WBGene00008017
        NDB locus_tag CELE_C38D9.9
        Panther gene CAEEL|WormBase=WBGene00008017|UniProtKB=Q9U3N0
          family PTHR23015
        NCBI gene 183320
        RefSeq protein NM_075044.3
        TREEFAM TREEFAM_ID TF322031
        TrEMBL UniProtAcc Q9U3N0
        UniProt_GCRP UniProtAcc Q9U3N0
    Species: Caenorhabditis elegans
    History: Version_change: 1 26 May 2004 16:54:48 WBPerson1971 Event: Imported: Initial conversion from CDS class of WS125
        2 26 Feb 2007 15:02:48 WBPerson4025 Event: Split_into: WBGene00045293
        3 01 Mar 2007 11:55:18 WBPerson2970 Name_change: CGC_name: fbxa-176
      Split_into: WBGene00045293
    Status: Live
  Gene_info: Biotype: SO:0001217
    Gene_class: fbxa
    Allele (59)
    RNASeq_FPKM (74)
    Ortholog (14)
    Paralog (223)
    Structured_description: Concise_description: This gene encodes a protein containing an F-box, a motif predicted to mediate protein-protein interactions either with homologs of yeast Skp-1p or with other proteins; this gene's encoded protein also contains an FTH/DUF38 motif, which may also mediate protein-protein interaction. Paper_evidence: WBPaper00012854
          Curator_confirmed: WBPerson567
          Date_last_updated: 17 Jun 2004 00:00:00
      Automated_description: Enriched in intestine based on RNA-seq studies. Is affected by several genes including daf-2; skn-1; and eat-2 based on microarray and RNA-seq studies. Is affected by four chemicals including multi-walled carbon nanotube; antimycin; and paraquat based on RNA-seq studies. Is predicted to encode a protein with the following domains: F-box-like domain superfamily; FTH domain; F-box domain; Domain of unknown function DUF38/FTH, Caenorhabditis species; and F-box A protein FB224. Paper_evidence: WBPaper00065943
          Curator_confirmed: WBPerson324
            WBPerson37462
          Inferred_automatically: This description was generated automatically by a script based on data from the WS291 version of WormBase
          Date_last_updated: 29 Nov 2023 00:00:00
  Molecular_info: Corresponding_CDS: C38D9.9
    Corresponding_CDS_history: C38D9.9:wp172
    Corresponding_transcript: C38D9.9.1
    Associated_feature: WBsf647661
      WBsf1002688
      WBsf1021306
  Experimental_info: RNAi_result: WBRNAi00042174 Inferred_automatically: RNAi_primary
    Expr_pattern: Expr1016248
      Expr1146169
      Expr2011499
    Drives_construct: WBCnstr00033304
    Construct_product: WBCnstr00033304
    Microarray_results (14)
    Expression_cluster (84)
  Map_info: Map: V Position: 12.9185 Error: 4.6e-05
    Positive: Positive_clone: C38D9 Inferred_automatically: From sequence, transcript, pseudogene data
    Pseudo_map_position
  Reference: WBPaper00012854
  Remark: Map position created from combination of previous interpolated map position (based on known location of sequence) and allele information. Therefore this is not a genetic map position based on recombination frequencies or genetic experiments. This was done on advice of the CGC. CGC_data_submission
  Method: Gene